Salvia splendens (scarlet sage): 121746587
Help
Entry
121746587 CDS
T07627
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121746587
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspl01002
]
121746587
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121746587
04121 Ubiquitin system [BR:
sspl04121
]
121746587
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121746587
Peptidases and inhibitors [BR:
sspl01002
]
Metallo peptidases
Family M67
121746587
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Others
Others
121746587
Ubiquitin system [BR:
sspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121746587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
NSUN5_N
PDDEXK_2
pre-PUA_NIP7
Motif
Other DBs
NCBI-GeneID:
121746587
NCBI-ProteinID:
XP_041996413
LinkDB
All DBs
Position
9:19299636..19307174
Genome browser
AA seq
508 aa
AA seq
DB search
MITRSSSGGGFNIAAVTKKIDVDNRISLRYYHRIADNILKQADIFREEKNIIDLYVMLLR
FSSLVTETIPCHKEYRTSLQSSKLNLKRKLNTAMTELEELKPAVSEKLQEMQYKHIYQLH
KQQKSQQSQTLEPSVEWPLVRPNLNKFSIKQPVTNQYGYQVPKAFSLSKPTGEHLQRVPL
SIPRAKEETLSKHSILGPNGLRGQWQGPTHYKVQYPSNLDFTPVQITGVNSTQNSTEDGI
VMKEENGGSKQDKSSLESVVPPKTDSQQIEESISLISFEDDSASQSEVIREPSPPPVLAE
VQDLIPASTPETQTESGLVNASDDALVCSEDPLQLHIPTELMNSFMKLAKSNTNKNLETC
GVLAGSLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQSC
FMSSIDVHTHYSYQIMLPEAIAIVMAPRDTSRKHGIFRLTSGGMTIIRHCPRRGFHSHDP
PSDGSPIYRQCTDVYMNPNLKFDVIDLR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgataactcgatcttcatctggaggtggattcaacatcgccgccgttaccaagaagatc
gatgtagacaatcgaatttctctacgctattaccacagaattgccgataatattctcaag
caggctgacatatttcgtgaagaaaagaatattattgacctctatgttatgctccttaga
ttttcaagtttggtgactgagacgataccttgccataaagagtacagaacatctctacag
agcagtaaactcaatctcaaaaggaaattgaatactgcaatgactgagcttgaggaattg
aaacctgctgtttcagaaaaacttcaggagatgcaatataaacacatttatcaacttcat
aaacagcagaaatctcagcaaagtcaaactttagaaccgtcagttgaatggcctcttgtt
agaccaaacctgaacaagtttagtataaaacagcctgtaactaaccaatatggatatcaa
gttccaaaagcattctcacttagcaaaccaactggagaacatctccaaagagtaccattg
agcattccgcgcgcaaaggaggaaactctttcaaaacattctattttgggcccaaatggg
cttcgtgggcagtggcagggtccaactcactacaaggttcagtatccaagtaatttagac
ttcactcctgtacagatcacaggggttaatagcactcagaattctactgaggatgggatt
gtgatgaaagaggaaaatggcggctcaaaacaagataaatcaagcttggaatctgtagtt
ccgccaaaaactgatagccaacagattgaagaatctatttccctcatatcttttgaagat
gacagtgcttcacaaagtgaggtaattagagaaccttctcccccacctgttctagcagag
gtacaggatttgattccagcctcaacgccagagactcaaacagaaagtgggttggtaaat
gcttctgatgatgctttagtatgttccgaggatcccctacagttgcacataccaaccgaa
ctgatgaacagttttatgaagctagcaaagtcaaacaccaataagaacttagaaacatgc
ggtgtccttgcaggttccctcaaaaacaggaaattttacatcactgctcttattattcca
aagcaagaatcaacttcagattcgtgtcagaccacaaacgaggaggaaatatttgaagtg
caggacaagcagtctctttttccccttggatggattcatacacatcctacacaatcttgt
ttcatgtcatcaattgatgtacatacacactactcttatcagatcatgttgccagaagcc
attgccatcgtcatggcaccaagggacacttcaaggaagcatggcattttccggttgact
tcaggtggcatgaccatcatcaggcattgcccgcggcggggtttccattcccacgatcct
ccttccgatggtagcccgatatacagacaatgtacagatgtttatatgaaccctaatctg
aaatttgatgtcattgatctacgttga
DBGET
integrated database retrieval system
