Salvia splendens (scarlet sage): 121746633
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Entry
121746633 CDS
T07627
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121746633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121746633
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
121746633
SWR1 complex
121746633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
121746633
NCBI-ProteinID:
XP_041996472
LinkDB
All DBs
Position
9:complement(24110342..24124277)
Genome browser
AA seq
2027 aa
AA seq
DB search
MASKGPRSKLDHESRAKRQKALEAPKEPQRPKAHWDHVLEEMVWLSKDFESERKWKLAQA
KKVAIRASKGMLDQATRGEKRVKEEEQKLRKVALNISKDVKKFWIKIEKLVLYKHQLELD
VKKKKALDKQLEFLLGQTERYSSMLAENLVNPLSLCKPSYLCNAEANPSTSGRRADESDN
GSQSDIKAVDEDYDLQSTEESEDDERTVDADEALITKEERDEELAALQSEVDLPLEEILK
RYAAHEGSREKSPQKDDDKPGTTGHNELNGKEDSMGDALVIEEGNSPVKSGRRCVESNGI
LSAPENHCPEVAENHKRSSSKKLLDSEKKQISHEFNDEQEDDDFVLSAREENEYDMDDET
TLVEEEELANAEKINTADEIALLQKESEVPIEELLARYKKDCDSDVDDDSRSLSTSGSVE
LLDSPEHRMSNLMQPDYGSNGLEPDICSHPEEEAECSGKSGEETQSENIIADAAAAARSA
QPTGNTFSTTKVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI
ALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERRIKRQGWLK
PNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT
GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISVMVEGQEKVNKEVVDRLHNVLR
PFLLRRLKRDVEKQLPSKHEHIICCRLSRRQRNLYEDFIASSETQATLANGNFFGMISVI
MQLRKVCNHPDLFEGRPIVSSFDMRGIDMQLSSPVCSMLAPGPFASVDLNGLGFVFSHLD
FFMTSWESEEIQTIATPSSLIQQRVNLSSLEDNWVRCKKKNNRHSIFDEIQKALLDERLR
EMKDRAAAVSWWNSIRCRRKPIYATGLRELVSVKHPVHDIHHQKHNPLSYLYSSKLSDIV
LSPVERFEKMADQVGSFMFAIPAARAPPPVSWCSKGGSPVFIHQTSKERWSQLFSPLLTP
FRPAIIRRQVYFPDRRLIQFDCGKLQELAVLLRRLKSEGHRALIFTQMTKMLDVLEAFIN
LYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDW
NPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGSYNTEF
FKKLDPTELFSGHGTVSQKDTLLDKTSKNGGEVTLSCVDLEAALKNAEDEADYMALKKVE
EEEAVDNQEFTEEAVGKLEDDELANEEEMKPDGPAEQPALNVKSDEGNVVSESHPVEEGA
LAIQNNEDDVDMLADVKQMAAAAAAAGQAIMSFENQLRPIDRYAVRFLELWDPIIDKTAV
EPNTQVEEAEWELERIEKLKDDMEAEIDDDEEPLVYESWDADFATEVYKQQVEALAQHKL
MEDLEREAQEKEALECCYSDSQRDFVTPKPKPKKKGKKAKFKSLKKGALVSKSISIKEES
SIEHMSIDDDLIYDDTPTSSDALSPCSTQEKKRKPSDNEVQRSRKKSKKLNASETGNIVL
YHKSPGKHQDELKDLKICDNGYFDNEKQINRNKARGKLSIPIMPLKRIFTIKPEKLKKKG
NIWSKDFLPSPDIWSPKEDAALCAAIHEYGPNWNLASEILYRMSDGGSYRGRFRHPVHCS
ERLRELIQRYVLSVNDVTTNDKAVGMGTGKGPLRVTEDNIRVLLGITSDLPDHEPLLQKH
FFSVLSAAWRNISHSSHSGNALLFQNRFYSSQEFYASASSKNSLGKSPDRLGFCNLPQCG
KLVAAALNRSCNIQTDDRLTITNPMEDTPIEKEILDLTLELETDMAEVLLPLPSVINVSI
LGSDPSTSFKGHAGEDQQFKSSRGTVESQFRTASAAHFDSCFGEESQELTTGDNRSSNSG
KNKLPVSEPVKPSKSKSRRASKDHTDSQHLTSTEVFQNLPLMPTDPSLKFDDLSSSFSDI
GFDSASLVDMDEGLSPDMTELVSSNYDPDLTSGLDDLSDFTEFIEMG
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaagggtccaaggtctaaacttgaccatgaatcgcgggctaagcggcagaag
gcccttgaagctccgaaagaacctcaacgtcctaaagcacattgggatcatgtcctggaa
gagatggtctggttgtcaaaggactttgagtcggagaggaaatggaagctggcacaggca
aagaaagttgctatacgagccagcaagggcatgcttgatcaggcaacaagaggcgagaag
agagtcaaggaagaggagcaaaagttgagaaaagttgccctcaatatttcgaaggatgta
aagaaattctggataaaaatagagaagctggtgttatacaagcatcagttggagcttgat
gtgaaaaagaagaaagctcttgataaacagcttgagttccttcttggacaaactgaaagg
tactcatcaatgctggctgaaaatcttgtcaatccactgagtctttgcaaaccatcttac
ttgtgcaatgctgaggcaaatccgagtacttctgggagaagagctgacgaatcagataat
ggatcccagtcagatatcaaagctgtagatgaagactatgatttgcaatccaccgaagaa
tctgaagatgatgagcgtactgttgatgcggatgaggctctcattactaaagaggagcgg
gatgaggagttggcagcattacaaagtgaagtcgatttacctctggaggagatactgaaa
cgttatgcagcccatgaaggcagcagagaaaaaagtccccagaaggatgatgataagcct
ggaacaactgggcataatgaacttaatggaaaagaagattccatgggagatgcccttgtg
atagaggaaggcaactcgcctgtgaaatctggtcgtcgttgtgttgaaagtaatggtatt
ttgtctgcaccagaaaaccattgtccggaggtggctgaaaatcacaagagaagttcttcg
aagaaacttcttgactcagagaagaagcagatctcacatgagttcaatgacgaacaagaa
gatgatgattttgtactctcagccagggaagaaaatgaatatgacatggatgatgaaaca
actctcgtggaggaagaagaattagcaaatgcagaaaaaatcaatactgcagacgagatt
gcacttctccagaaggaaagtgaagttcctatagaggaattgcttgcaaggtataagaag
gattgtgacagtgatgtagatgacgactctagatccttgtctacttctggttctgtagag
ttattggattcaccagaacataggatgtctaaccttatgcagcctgattatgggtcaaat
ggattggagccagatatatgctcccatccagaagaagaagctgaatgttcaggaaaatct
ggagaagagacacaaagtgaaaatataattgctgatgcagcagcagctgccaggtcagca
caaccaactggaaatacattctcaacgacaaaggtgcgaacgaagttcccttttcttcta
aagtttcccctgcgtgagtatcagcatattggtttggattggcttgtgaccatgtatgag
aagagactcaatggaatacttgctgatgagatggggttgggtaagacgattatgaccatt
gcgctgcttgctcacctggcttgcgagaaaggaatttggggtccacatctcattgtcgtt
ccaactagtgtcatgctcaattgggagactgagtttcttaaatggtgtcctgctttcaaa
atattgacatactttggaagtgctaaagagcggagaataaagaggcaaggatggttgaaa
cctaattcatttcatgtttgcattacgacttatagactcgtcatccaagattcaaaggtt
ttcaagaggaagaagtggaagtaccttattttggacgaagcgcatctaataaagaattgg
aagtcacaaaggtggcagacgttactcaattttaactccaagaggcgcattctactaact
ggtactccattacagaatgatcttatggaactgtggtctctgatgcatttcttgatgcca
catatttttcagtctcaccaagaatttaaggattggttcagtaatcctatatccgtcatg
gtagagggacaagaaaaggtaaacaaagaagtagttgaccggctgcataatgtactccgt
cccttcttacttcgccgattgaaaagggatgtcgagaaacagcttccttcgaagcatgaa
catattatatgttgtaggctgtcaaggagacagcgtaacttatatgaggactttattgct
agctccgagactcaggctaccctagctaatggtaatttttttggaatgatcagtgttatt
atgcaacttcgtaaagtttgcaatcatcccgatctatttgaaggccgtccaattgtaagt
tcttttgatatgcgtggtatagacatgcaacttagctctcctgtttgctcaatgcttgcc
cctgggccatttgcatctgttgatcttaatggcttaggatttgtcttctctcatctggat
ttcttcatgacatcttgggagagtgaagaaattcaaactattgctacaccttcaagcttg
attcagcaacgtgtaaacctgtctagtttggaggataattgggtcagatgcaagaaaaag
aataacaggcattcaatatttgatgagattcagaaggcactattggatgagaggttgaga
gaaatgaaagatcgtgctgcagctgtttcgtggtggaattctataaggtgcagaagaaaa
cccatttatgccactggcctcagggagcttgtcagtgtcaagcatcctgtccacgatatt
catcatcagaaacacaatcctttgtcatatctgtattcatccaagctttctgatattgta
ctttccccagttgaaagatttgaaaagatggctgatcaggttggaagtttcatgtttgca
atacctgctgcacgtgcaccacccccagtttcctggtgcagtaagggtggatcacctgtg
tttattcaccaaacgtccaaagagagatggtcacaacttttttcccctcttcttactcca
tttcggcctgctattatccggaggcaagtttactttccagatagaagacttatccagttt
gactgtggtaagctgcaggagcttgcagttctgctccggcgacttaaatcagagggtcat
agggctctgatattcacccaaatgacaaagatgcttgatgttttagaggcattcatcaat
ctttatggctatacttacatgcgtctagatggttctactccgcctgaagagaggcagaca
ctcatgcagaggtttaatacaaaccccaagatatttctttttattttgtcaacacggagt
ggaggtgtaggcatcaacctagttggggcagacactgtgattttctatgatagtgactgg
aatcctgctatggatcaacaagcacaagataggtgtcacaggataggtcagacacgtgag
gttcacatatataggttgataagtgagagcacaatcgaagagaatattctgaaaaaggcc
aatcagaagcgggctttggatgatttagttatacaaagtggaagctacaataccgaattc
tttaagaagctggatccaacagaattgttttcgggccatggaacagtttcccaaaaggat
acactactagacaaaacatccaagaatggcggtgaggtaacattatcttgtgtggatttg
gaagctgccttaaagaatgctgaagatgaggcagactacatggcgctaaagaaagtggaa
gaagaagaggctgtagataatcaagagttcactgaagaagcagttggcaagttggaggac
gatgagctagccaatgaagaggaaatgaagcctgatggtcctgctgaacagcctgctttg
aatgtgaaatcagatgagggcaatgttgtgagtgaaagccatccagttgaagaaggagcc
cttgctatccagaataatgaagatgatgttgatatgctggctgacgtcaaacagatggcc
gcagctgcagctgcagctgggcaggctatcatgtctttcgagaatcagttacgccccatt
gatcgatatgcagtacgctttcttgagttgtgggacccaattattgacaagactgcagtt
gagcctaatactcaagtcgaggaagctgaatgggagctggagcgcattgagaagttaaag
gacgatatggaggccgagattgatgatgacgaagaaccgttggtgtatgaaagttgggat
gctgattttgcaactgaagtatataaacaacaagttgaagctctagcacaacacaagctg
atggaagatctggaacgtgaagcccaggagaaagaggctttagaatgttgttattcagac
tctcaaagggatttcgttactccaaaaccaaaaccgaaaaagaaaggcaaaaaggccaag
ttcaaatccttgaagaaaggggctctagtttcgaagtccatatctataaaagaagagtca
tcaatagaacatatgtctattgatgatgatttaatatatgatgacacccccacatcttca
gatgctttatctccctgctcaactcaagagaagaaacgtaaaccttcagataatgaagta
caaagaagcagaaagaagtctaaaaagctgaatgcttctgaaactgggaacattgttttg
tatcacaaatctcctggaaagcatcaagatgaacttaaagacttgaagatttgtgataat
ggttactttgataatgaaaagcaaataaatagaaacaaggcacgaggaaagctttctatc
cccatcatgcctctgaaacggattttcacaataaaaccagaaaagttaaaaaagaaagga
aacatttggtctaaggatttcctcccttctcctgatatttggtcaccaaaggaagatgcc
gctttatgtgcagctatccatgagtatggtccaaattggaatttggcaagtgaaatcttg
tacagaatgagtgatggtgggtcgtaccggggcaggtttcgtcatcctgtccattgctct
gagaggcttagggaactaattcaaagatatgtgttatcagttaacgatgttacaactaat
gacaaagctgttggcatgggtacagggaagggtcctctaagagtaactgaggataacatc
cgggtattgcttggcatcacttctgatttaccagatcacgaaccacttcttcaaaagcat
ttcttttcggtgctctcggctgcttggaggaatatctcacactccagccacagtggcaat
gctctattatttcagaacagattctattcatcccaggagttttatgcctctgccagcagt
aagaattccttgggaaaatcaccagataggctgggattctgtaatttgcctcagtgtggg
aagttagttgccgctgctctgaatagaagctgcaacattcaaacagatgacaggctaact
atcaccaatcctatggaggatacccctattgaaaaggagatattggatttaactcttgag
cttgaaacagatatggctgaagttctactacctcttccctcggtcattaatgtgtcaatt
cttggttcagacccttccacgtctttcaaggggcatgctggagaggatcagcaatttaaa
tcttccaggggcacagttgagagtcaattcagaactgcatcagctgcacattttgacagt
tgttttggggaagaatcacaagaattaaccacgggcgataacaggtcttcaaattcggga
aaaaacaagctccctgtttctgagccggtcaagccttctaaatcgaagtcgagaagagca
agtaaagatcacactgactcgcaacatttgacttccactgaagtgttccaaaatctacca
ttgatgccaactgaccccagtctgaagttcgatgacttgtcctcctccttttctgatatt
ggatttgactctgccagcctggtggacatggatgaaggtttatccccagacatgacagag
ctggtctcgtcaaactatgacccggacttgacgtctgggctggacgacctgtcagatttt
actgaatttatagaaatggggtaa
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integrated database retrieval system
