Salvia splendens (scarlet sage): 121746841
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Entry
121746841 CDS
T07627
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121746841
03036 Chromosome and associated proteins [BR:
sspl03036
]
121746841
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121746841
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121746841
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121746841
microRNA pathway
RISC loading complex
121746841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121746841
NCBI-ProteinID:
XP_041996716
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All DBs
Position
9:5870663..5876720
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AA seq
892 aa
AA seq
DB search
MERGTPEMLPPPPPVVPPNVVPQKVAIGKRVPMARPGVAIRGQSISLLVNHFKVTVAKSE
GYFYHYSVSIKYEDGNPVDAKGIGRKILEKLHETYVVELDGKKFAYDGEKSLFTIGPLPQ
NKLEFTVILDEVSSNRNTGRGSPEADGSPTDLDRKRLRKQSRSKTYNVAISYAAKIPMQA
IPNALRGQDSEHFQESVRVLDIILRQNAAQQGCLLVRQSFFHNDDRNYVDLGGGVFGCRG
FHSSFRATQGGLSLNMDVSTTMIVRPGPVIDFLLFNQKIDHPSHIDWVKAKRALKNLRVR
ATNSNREFKISGLSDFVCKEQTFSLKQRSEAREVEITVYDYFVNERNIQLKYSGEMPCLN
VGKPKRPTYIPVELCSLVSLQRYTKALSNFQRAALVEKSRQKPHERMNALKNGLSKSNYA
AEPLLQSAGVTISTEFTRIQGRVLAPPKLRVGNGEDFAPRNGRWNFNQKKLVEPVKIERW
AVVNFSARCNMQNLCKDLIRCGNMKGIIIHDPYVMIEEMAQSRRSPSPIRVDDMIGLVKS
KLPGPPQFLLCILPEKKNSDLYGPWKKRNLSELGVVTQCIAPTRINDQYLTNLLLKINAK
LGGLNSVLTTENAPPRPLPLVYSKPTIIIGMDVSHGSPGRDVPSVAAVVSSRKWPLISKY
RAAVRTQPPRSEMIECLFKPTSATGDAGIFRELLNDFYDSCGRRPEQIIIFRDGVSESQF
NQVLNIELEQIIQACKFRDEKWEPKFMLVVAQKNHHTKIFQANSPDNVPPGTVIDNGICH
PRNNDFYMCAHAGMIGTTRPTHYHVLYDELGYSPDDFQEFVLSLSYVYQRSTTAISIVAP
ICYAHLAAAQMSQFLKFEDLSDKSSSHSGGGGPTVPELPVLNEKVRSSMFFC
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggtacaccagagatgctacctccacctccccctgtggtcccacctaatgtt
gtgccacagaaagtagctattgggaaaagggttcccatggctaggcctggagttgccatc
aggggccaaagcatctcactcttggttaaccattttaaggttactgttgccaagagtgag
ggctacttctatcactacagtgtctcgatcaagtatgaagatggtaaccctgttgatgca
aaaggaattgggagaaagatactagaaaaacttcatgaaacatatgttgttgagctggat
gggaaaaagtttgcatatgatggtgagaagagcttgttcactattggtcctttgcctcaa
aacaaactggagtttactgtgattttggatgaagtttcctcaaataggaacactgggaga
gggagccccgaagctgatggtagccctactgaccttgatagaaaacgtctgcgtaagcag
tctcgttcaaagacttacaatgtggcaataagctatgctgcaaagatcccaatgcaagcc
attcccaatgcacttcgggggcaagattctgagcactttcaagaatctgtgagagtgcta
gatatcattctgagacagaatgctgctcaacaggggtgccttctagtgcgtcagtccttc
ttccacaatgatgatagaaactacgtggacttgggaggtggtgtcttcggttgccggggt
tttcattctagttttagagcaacacaagggggtctttcgttgaatatggatgtatcaacc
accatgatcgttaggcctggaccagtgattgactttctcctgttcaatcaaaaaattgat
catccctcacacattgattgggttaaggccaagagggcattgaagaatctgagggtccgg
gcaactaattcgaatagggaattcaagatcagcggcttgagtgacttcgtgtgcaaggag
caaacgttctcactgaaacaaagaagtgaagcacgagaagtggagatcactgtatatgac
tattttgtcaatgagcgcaatatccagttgaagtattccggagaaatgccatgtctgaat
gtggggaaaccaaagcgtccgacttacattcctgttgagctatgctccttggtatccctt
caacggtatacgaaggctttgtcaaattttcagagagctgcacttgtagaaaagtctagg
caaaagcctcatgagaggatgaatgccttgaaaaacggcctgtcgaaaagcaactatgct
gctgaacctcttcttcaatcggctggagttacaatcagcactgaatttactcgcattcag
ggccgtgtcttggcaccacctaagctgagagttggcaatggagaggactttgcgccacgt
aacggaaggtggaacttcaaccagaagaaactggttgagcctgtcaaaattgaaagatgg
gctgttgttaacttctctgctcggtgcaatatgcaaaacttgtgcaaagacttgatcaga
tgtggaaacatgaaaggaataatcatacatgatccttatgtaatgatcgaagagatggct
cagtcaagacgcagcccttctcctatccgagttgatgatatgattggcttggtcaagtcg
aaacttccaggcccccctcagtttcttctctgcattctgccagaaaagaaaaactctgat
ctctatggcccttggaagaagaggaatctttctgaacttggtgtggtgactcaatgcatt
gcgccaacacgcatcaatgaccagtacttgacaaatttgctgctgaagatcaatgccaag
cttggtggcctgaattctgtcttaactacagaaaatgctccaccaagaccactacccctg
gtttatagcaaacccaccattattataggaatggatgtttcccatggttcacctggccga
gatgtcccctctgttgctgcggttgtcagttcgaggaaatggcctttgatatccaaatac
cgggcagcagtccgtactcaaccgccaagatctgagatgatcgagtgtctgttcaagcca
acttctgcaactggagatgcaggcattttcagggagctactgaacgatttctatgatagc
tgtgggcgtagacctgaacagataatcattttcagggatggagtgagcgagtcccagttc
aaccaagtcctgaacattgagctagagcagattatccaggcttgcaagtttagagatgag
aaatgggaacccaagttcatgctggttgtggcacaaaagaaccaccataccaagatcttc
caagccaactctcctgacaatgtccctcctgggacggtgattgacaatggaatatgccat
cctagaaacaatgatttctatatgtgtgctcatgctggcatgattggaacaacacggccc
acacactatcatgttctctacgatgagctcggctactctcctgatgattttcaggagttt
gtgctctccttgtcctatgtgtaccagagaagcactactgccatatcaatagtggctcct
atatgctatgctcatcttgctgcggctcagatgtctcagttcctgaagtttgaagacttg
tcggacaagtcatcgagccacagtggtggaggtggccctactgtgcctgagcttccagtc
ctgaatgagaaagtccgcagctccatgttcttctgctga
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