Salvia splendens (scarlet sage): 121747014
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Entry
121747014 CDS
T07627
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like
KO
K12133
MYB-related transcription factor LHY
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121747014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121747014
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121747014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121747014
NCBI-ProteinID:
XP_041996926
LinkDB
All DBs
Position
9:complement(1319773..1325068)
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AA seq
747 aa
AA seq
DB search
MDPYSSGEDVIVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAIVKGVPIGKSLDIKIPPPRPKRKPNNPYPRKTSAGTSASQVGVN
DGKISNPVSSSCQSKVTVELEKPSDDEKIGNSKEYYDKDDCFEAFTLKTAPCEFPSSANK
IASVSDAPKNSCTFRQYIPLSGEAMDQDETAASQVTTEAKGLQIEKSVNDQPLQDKLAFK
ISNDELKQSENDDTVGTTDAPATQNYPRHVPVHILDGSLGMRAFDISQDTSYADSAFCQM
GGVPAPENHFTNPAASGISEHYDSASKSSVHQSFPSYHPVFAPIQSQDDYQSFLHLSTTF
SSLIVSALSQNPLVYAAATFAATSWPSLNPEASVKPSTASAAAFQTRPVTSTPSLAALAA
ATTAAATAWWAAHGLLPLCAPYHPGFTSSPASASAAPMACSQDQAVNSEKRVSSPDPALG
GQQLEPECSEALHKKQSVSKLPTLSSSDSEENEGVKLNVGLATSGTEKVEATGELKDVDK
SKSKKPADRSSCGSNTPSSSEVEADPTEKHAEGEEEKQTEEQEKQDDIEAAMNPFCDPFN
RRCRSTINVSDSWKEVSDEGRLAFQKLFSRQVLPQSFSPRHANKGNINCLRENEKAEKGL
QLDLNGTAWGSFSQKKGEEDGASVIGENKEKEGLYTGLGQCKLSARRTGFKPYKRCSVEA
KECGVSGNGHDEEKCPKRLRVEGEAST
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggacccttattcatcgggtgaagacgttatcgttaagacaaggaaaccttacacaatt
actaagcagcgcgagcgatggactgaagaggagcataataggtttctagaagctctcaag
ctctatgggcgtgcttggcagcgaatagaagaacatataggaaccaagactgctgtgcag
ataagaagtcatgcacagaagttttttacaaagttggaaaaggaggccattgttaaagga
gttccaattgggaaatctcttgacatcaaaatccctccaccacggcctaaaagaaaaccg
aataatccttatccaaggaagacaagtgcgggaacttctgcttcccaagtgggggtgaat
gatgggaaaatatcaaacccagtttcttcctcatgtcagagtaaagtaaccgtggaactt
gagaaaccttccgacgatgagaaaattggaaacagtaaagaatactatgacaaggatgat
tgctttgaggctttcactctcaagacagctccctgtgaatttccatcttcagcaaacaaa
attgcatctgtatctgatgctcctaaaaactcatgtacttttagacaatatatcccactt
tcgggagaagcaatggatcaggatgaaacagctgcatcccaggtcactaccgaagccaaa
ggacttcagattgagaagtctgttaatgaccagcctcttcaggataagctcgctttcaag
atttcaaatgatgagctgaagcagtctgaaaatgatgatacagtgggaactactgatgcc
ccggccacacaaaattatcctcgccatgtccctgtgcacattctggatgggagcttagga
atgagggcattcgatatctcccaggatacatcgtatgcagattctgcattttgtcaaatg
ggcggggtccctgctcctgaaaatcatttcacgaatccagctgcttctggtatttctgag
cattatgatagtgcatcaaaatcttcggttcaccagtcattccccagttatcatccagtc
ttcgctcctatccaaagtcaagatgattaccagtcatttctgcatttatcaaccacattt
tccagtcttattgtatctgctttatcgcaaaatcctttagtctatgctgcagctaccttt
gcagcaacttcgtggccttctctgaatccagaagcttcagttaaaccatctacagcctca
gctgcggcgtttcaaacaaggcctgtaacttcgactcctagtttggctgcacttgctgca
gctaccacagcagcggcaactgcatggtgggcagctcatggcctacttcctttatgtgct
ccgtatcatcctggctttacatcttctcctgcatcagcatcggcagctccaatggcttgc
agccaagatcaagctgtaaacagtgaaaaaagagtgagcagtcctgatcctgccttaggt
ggtcaacaactcgaaccagaatgctccgaggctcttcacaaaaagcaatcagtttcaaag
ttgccaacattatcatcttcagattctgaagaaaatgaaggtgtgaaactgaatgttggc
ttagccacttctggaacagaaaaggtcgaggctacaggtgagctgaaagatgtagacaag
tccaagagcaaaaagccagcagaccgttcttcatgtggatcgaacactccctccagcagt
gaagtagaagctgatcctacggaaaagcatgcagaaggggaagaggaaaaacagacagag
gaacaagagaagcaggatgatatagaagctgcaatgaatcctttttgtgatccatttaat
cgacgttgtagaagcacaattaacgtcagtgactcctggaaggaagtatcggatgagggc
cggctggcgtttcaaaaactcttctctagacaagtactgccccagagcttttcaccacgt
cacgcaaataagggcaacatcaactgcctcagagaaaatgagaaagccgaaaagggactc
cagttagacctaaatggtacggcatggggttccttttcccagaagaaaggcgaggaagat
ggcgcatctgtgattggcgagaacaaggaaaaagaaggcctgtacaccggactgggacag
tgtaagctatcagcgcgcagaactggattcaaaccttacaagaggtgttcagtggaggcg
aaagagtgtggtgtgtcgggaaacggccatgatgaagagaaatgccccaagagattgcgc
gtggaaggagaggcttctacttga
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