Salvia splendens (scarlet sage): 121747252
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Entry
121747252 CDS
T07627
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121747252
03036 Chromosome and associated proteins [BR:
sspl03036
]
121747252
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121747252
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121747252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Spt6_S1
HHH_9
Tex_central_region
HHH_3
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
121747252
NCBI-ProteinID:
XP_041997189
LinkDB
All DBs
Position
9:complement(32393847..32401292)
Genome browser
AA seq
1618 aa
AA seq
DB search
MTGKNVISDDEDEIGVEEEERDEEPYGDRHGDRGGDDEDEEDDEEGQDEYENDGFIVNDV
DEEEDEEEDRVDSDEEQKKKKRKKRDQFMLDEDDYELLQESNISVNRSKLESKKFKRLKK
ARRDAEEEPFGFSDEEEFDRSGKGGRTAEEKLKRSLFGDDDGQPLEDIAEEDEQLEEEDD
ADIGEEDEMADFIVDEEEVDEHGTPVRRKKPKKNRQRPGISSSALQEAHEIFGDVEDLLR
LRKIDVRDRFGETSERSLEDQFDPSVLSEKYMTEKDDQIREIDIPERMQISEESTGHPPT
DEFSVKMETEWIYNQLVSGMVPLFNRSGTTNEEVDDELKRHIARFLELIHVQNLDVPFIA
MYRKEEVLSLLKDPTDREAGSENDMNQKPTLKWHKVLWAIQDLDQKWLLLLKRKSALQSY
YTKRFEEERRRVYDETRLRLNEQLFQSITKSLEAADSEREMDDVDSKFNLHFPPGEVVLD
EGQFKRPKRKSHYSICSKAGLWEVASKFGYSSEQFGLQISLEKMRMDELEDAKETPEEMA
SNFTCAMFEIPQAVLKGARHMAAVEISCEPCVRRHVRSIFMDNAVVSTSPTPEGNMAIDS
FHQFYGVKWLKDKPLNRFEDAQWLLIQKAEEEKLLQVTIKLPEVVLDKLISDSNDYYLSD
GVSKSAQLWNEQRKLILNDAFNNFLLPSMEKEARSLLTSRAKSWLLSDYGRLLWDKVSVA
PYQRKENDVSSDEETAPRVMACCWGPGKPATTFMMLDSSGEVLDVLHAGSLSIRGQSVNE
QQRKRNDQQRVQKFMMDHQPHIVVLGANNLSCTRLKEDIYEIIFKMVEDNPRDVGHEMDN
LNIVFGDESLPHLYENSRISVDQLPSQEGIIRRAVGLGRHLQNPLAMAATLCGPGKEILS
WKLNPLENFLTPDEKYGMVEQVMVDVTNQVGLDINLAASHEWLFAPLQFISGLGPRKAAS
LQRSLVRAGAIFTRKDLLQSHGLGKKVFINAVGFLRVRRSGLTSSSSQFIDLLDDTRIHP
ESYILAQDLAKDIYREDGNDDANEDDDVLEMAIEHVREKPHLLRAVDVHEYAEQKNHLNK
KETLNDIRLELMEGFQDRRRPFVEPSQDEEFGMITGETEEELSEGRIVQATVRKVQGQRA
ICVLESGLAGILSKEDYMDDWRDINELNEKLREGDILTCRIKSIQKNRYQVFLTCRESEM
RSNRYKSHRMTDPYYHEERGTLQTVQEKARKEKELAKKHFKPRMIVHPRFQNITSDAAME
FLSDKDPGESVIRPSSRGPSFLTLTLKVYDGVYANKDIVEGGKEHKDITSLLRIGKTLKI
GEDTFEDLDEVMDRYVDPLVAHLTSMLNYRKFRRGTKTEVDELLRIEKAENPMRIVYCFG
ISHEHPGTFILTYIRSSNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQKHIDDSSDSTP
SLRSVAAMVPMRSPVTGGSSGSGGGWGNSSNDGGWRGGQSSDRDRNSGPRSGRGDYRNGD
GHPSGARPPYGGRGRGRGRGRGSDSYGNGRGERQDQDRGSQRWGSKDGDGGGGWGSGFSG
SKAQDSPGGGSWGGGGGNAGEGSSTGWGSWGGDAGGSGADAGNSGWGDAKKSSDGGGW
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaaaaatgtgatctccgacgatgaagatgagattggagtcgaagaagaagaa
agagacgaggagccttatggagaccgccacggtgatcgtggcggtgacgatgaagatgaa
gaagacgacgaggaaggacaggatgaatatgaaaatgatggatttatagtcaacgatgtc
gacgaagaagaggatgaggaagaagatcgagttgatagtgatgaggagcagaagaaaaag
aaaagaaagaaaagggatcagttcatgcttgatgaggatgattatgaactcctccaggaa
agcaatatatctgtcaatcgttcaaagctcgaaagtaagaagtttaagagactgaagaag
gctaggagggatgcagaagaagagcctttcgggttttccgatgaagaagaatttgataga
agtgggaagggtgggcgtactgcagaggagaagctcaagcgtagtttgtttggtgatgat
gatgggcaacctcttgaggatattgcagaggaggatgaacagcttgaagaagaagatgat
gcagacattggtgaggaggatgagatggctgatttcattgttgatgaagaagaagttgat
gagcatggaacccctgttaggagaaagaaacctaagaaaaacagacagcgcccggggatt
tcctcatctgcactccaggaagcacatgaaatttttggtgatgttgaagatctcctgagg
cttcgcaagatagatgtgcgagacaggtttggtgaaactagtgaaaggagtcttgaagat
cagtttgatcctagtgtgctttctgaaaagtacatgacagaaaaggatgatcaaatacgg
gaaatcgatattcctgaaagaatgcagatatctgaagaaagtacaggccaccccccaaca
gatgagttcagtgtcaaaatggagaccgagtggatatacaatcaacttgtcagtggtatg
gtacctttgttcaacaggagtggtactacaaatgaagaagtggatgatgagctgaagcgg
catatagctagattcttggagttgattcacgttcagaatttagacgtcccattcattgct
atgtacaggaaagaggaagtattaagccttctaaaagatccaactgatcgcgaagctggc
agtgaaaatgatatgaatcaaaagcctacgctgaagtggcacaaggtgctttgggcaatt
caggacttggatcaaaagtggcttcttcttttgaaaagaaaaagtgctctacagtcatac
tatactaagcgatttgaagaagagagaaggagagtgtatgatgagacacgcctaagatta
aatgaacagctgtttcagtcaatcactaagtcactcgaagctgctgattcggaaagagaa
atggatgacgtagactcaaaatttaatttgcatttccctcctggcgaagttgtcctagac
gaaggccagtttaaaagaccaaagagaaaatcacattacagcatttgtagtaaagctgga
ctgtgggaggttgcaagcaaatttggttacagctctgagcaatttggtttgcagatatct
ctggagaaaatgagaatggatgaattggaggatgctaaggaaacaccagaggaaatggct
tctaatttcacctgtgcaatgtttgagatacctcaagcggtattgaaaggcgcaaggcac
atggcggcggttgaaattagctgtgaaccatgtgttaggagacatgtgcgcagtatcttt
atggacaacgctgtagtgtcaactagtcctacacctgagggaaacatggctattgattct
tttcaccagttttatggagtaaagtggttgaaggacaaaccacttaatagatttgaggat
gctcaatggcttttgattcagaaagctgaagaggagaagctcttgcaagttactataaag
ctgcctgaagtagtccttgataagttgataagtgactcaaatgattattatttgagtgat
ggtgtaagtaaatctgctcagttatggaatgagcagaggaaactgattcttaatgatgca
tttaacaattttcttcttccttcaatggaaaaagaagcaagatcactgctgacaagtaga
gcgaaatcatggctactatcagattatgggaggctattgtgggataaagtatctgttgca
ccataccaacggaaagagaatgatgtcagttctgatgaagaaactgcacccagggttatg
gcttgctgttggggccctggaaagccagcgactacctttatgatgttggattcatctgga
gaagttttggatgtattgcatgctggttccctcagcattcgtggtcaaagtgtcaatgaa
caacaacgtaaaagaaatgatcagcagagagtgcaaaagtttatgatggaccatcaacca
catattgtagttttaggagcaaataatttgtcttgtacgcggttgaaggaggacatttat
gagataatcttcaagatggtggaagataatcctcgtgatgttggtcatgagatggataat
ctgaatattgtctttggcgatgaatctttaccgcacctgtatgaaaattctcgtatctca
gttgatcagcttccttcacaagaaggtatcattagacgtgctgtgggtcttgggcgtcat
cttcagaatccattagcaatggctgccacattatgtgggccgggtaaagagatattatct
tggaagcttaaccctttggagaactttcttactcctgatgagaagtatggaatggttgaa
caagtgatggtagatgtaacaaaccaggtgggccttgatattaatttggctgccagtcat
gaatggttatttgctcctctacaatttatttctggtctaggaccaagaaaagcagcttct
ctccagaggtccctagtaagagcaggtgccatcttcactaggaaagacctgctgcaatct
catgggcttggcaaaaaggtttttatcaatgctgttgggttcctccgagtgcgacgtagc
ggattgacttccagtagtagtcaatttattgatctgttagatgacaccagaattcatcca
gaatcatatattctcgcacaagatctggccaaggatatttatcgggaggatgggaatgat
gatgccaatgaggacgacgatgtcctggaaatggcgatcgagcatgtcagggagaagcca
catttactgagagctgtagatgttcatgaatatgctgagcagaaaaatcatctgaacaag
aaagaaaccctcaatgatattagattggaattgatggaaggttttcaggatcgtcgcaga
ccctttgtagaaccaagtcaggatgaagagtttggcatgatcactggagagactgaagag
gaactctctgaaggaagaattgtgcaggccacagttcgaaaggttcagggtcagagagca
atttgcgtccttgaatctggattagctggcattctcagtaaggaggattacatggatgat
tggagggatatcaatgagttaaatgagaagctgcgtgagggtgatattttgacttgcaga
attaaatcaattcagaaaaatcgctatcaggtgtttttaacttgtcgagaaagtgaaatg
aggagtaaccgttacaagagtcacagaatgacagatccttactatcatgaagaacgcggt
actctgcaaactgttcaggaaaaagctcgcaaggagaaggaacttgcaaagaagcatttc
aagccaagaatgattgttcacccacgcttccaaaatataacgtctgatgctgcgatggag
tttttgtccgacaaggatcccggtgaaagtgtcatacgccctagttctcgtgggccatca
tttttgacactgactctgaaagtttatgatggggtatatgctaacaaggacattgtagaa
ggtggaaaagagcacaaggatataaccagcttgcttcggatcgggaaaacactgaaaatc
ggagaggatacatttgaagatcttgatgaggtaatggatcgttatgtagatccactggta
gctcatttgacgtcaatgctgaattaccgaaagttcaggaggggtactaaaactgaagtt
gatgagctcctcagaattgaaaaggccgagaatcctatgagaattgtatattgctttgga
atatctcacgagcatcctggcacattcatcttgacgtatatacggagttctaatcctcat
catgagtacataggtctctatccaaaaggatttaagtttcggaaacgaatgtttgaggat
atagaccgtcttgtggcttattttcagaaacatattgatgactcatctgactctactcca
tcgctacgatcagttgctgctatggtgccaatgaggagtcctgtaactgggggctcatct
gggtccggtggtgggtggggcaattcatccaatgatggaggctggagaggaggccagtct
tcggacagagacaggaattctggccctagaagtgggaggggtgattacagaaatggtgat
gggcatcccagtggagcaagaccaccatatggtgggcgaggacgtggtcgtggccggggc
cgtgggtcagattcttatggtaatggcaggggtgagaggcaggatcaagaccgtggttca
caaaggtggggttccaaggatggcgatggtggtggtggatgggggagtggcttctctgga
tcaaaagcccaggattcaccgggcggtggtagttggggaggcggtggtggtaatgctggt
gagggcagcagcactggttggggtagctggggaggagatgctggtggttcgggtgcggat
gcaggtaattcgggttggggagatgccaagaagagttcagatggcggtggttggtga
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integrated database retrieval system
