Salvia splendens (scarlet sage): 121747463
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Entry
121747463 CDS
T07627
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121747463
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121747463
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121747463
NCBI-ProteinID:
XP_041997431
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Position
9:complement(9334103..9336010)
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AA seq
437 aa
AA seq
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MDPIRFVLVFLISLVALVTAKANNTETDDIVWRERALQARQANQQAYEPNPHIVLNHLNS
HVHKAFKGYNSTRRGLVGKRHSGPCEATNPIDQCWRCDPHWEKNRKKLADCVLGFGRHTT
GGKAGKIYMVTDPSDNDLVNPKPGTLRHAVIQTEPLWIIFARHMVIRLSQELIFTCNKTI
DGRGAQIQITNGAGFMIQYVSNVIIHNIKIYDIKVGSGGLVRDSITHYGQRGQSDGDAVS
VFGSSNIWLDHLSLSSCYDGLIDVVKGSTAVTISNCHFARHNDVLLFGASDSYSDDKIMQ
VTLAFNHFGKGLIQRMPRVRYGYTHIVNNDYTNWEMYAIGGSQGPTLLSQGNRFIASDNM
NAKEVTKREYTTESVWKNWVWKSEGDVLQNGAFFIQSGDPHHKFVHGPEYIPPKPGQFAS
TLVRHSGHLKCIPGLPC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggatcctattaggtttgtgttggttttcttgatttctcttgtggccttggtcaccgca
aaggcaaacaatactgagacagacgacatcgtatggcgagaacgtgcattacaagcgagg
caagctaatcaacaggcgtatgaacccaatcctcacattgtcctaaatcatttaaactca
catgttcacaaggcatttaaaggatacaactcgacaagaagaggtctagtaggtaagcgc
catagtgggccatgcgaggccacaaaccctatcgaccaatgttggaggtgtgatccacat
tgggaaaaaaaccgcaagaagctagccgattgtgtcctagggttcgggcgccacaccacg
gggggcaaggcgggaaagatctacatggtgacggacccctcagacaacgacctagtcaac
cctaagccgggaaccctaaggcacgcggtgatccagacagagccactctggatcatattc
gcgcgccacatggtgattcggctctctcaggagctgatcttcacgtgcaacaagaccatc
gacgggcgcggggctcagatccagatcaccaatggcgcgggattcatgatccagtacgtg
agcaacgtgatcatacacaacatcaagatctacgacatcaaagtgggcagcggaggcctc
gtgcgagactccatcactcactacgggcagcgtgggcagagcgacggcgatgctgtctcc
gtgttcggatctagcaacatttggcttgaccacttgtccctatctagttgctatgatggc
ctaatcgatgtggtcaaagggtcgacggctgtcaccatctcaaattgccatttcgctcgc
cataatgatgttttgctatttggagcaagcgatagctactcagatgacaagataatgcaa
gtaacattggcgtttaaccattttgggaaaggtttgattcaaagaatgccgcgagtgagg
tatgggtacacacacattgtgaacaacgactacacaaattgggaaatgtacgcgatcgga
ggaagtcaaggccccaccttacttagccagggcaaccgcttcattgcctcagataacatg
aacgccaaagaggtgactaagagagagtatacgacagagagtgtgtggaagaattgggtg
tggaaatctgagggagatgtgttgcaaaatggcgcgttttttatccaatcgggagatcct
catcataagtttgtacatggccccgagtatattccacctaaaccgggccaatttgcaagc
acgttggtgcgacactccggccatttgaaatgtattcccggtctaccttgttaa
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