Salvia splendens (scarlet sage): 121747591
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Entry
121747591 CDS
T07627
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Module
sspl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121747591
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
121747591
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
121747591
NCBI-ProteinID:
XP_041997596
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Position
9:complement(6428577..6430833)
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AA seq
401 aa
AA seq
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MIKTCFLCLLVSHVMLGIDGAPKGRILQGEAVFDITNYGAKGDGTTDDAMALIQAWRAGC
DGTGAARILVPAGKSFMMGEVILSGPCKAVKPIVLDIQGTLNANPDPSSYSNMMWILIEH
VDGMIVTGGGTIHGQGQNVWKYADEGNRMPVSFTFQSSQNGDINNLNFVDAMGFHTKLID
SIDLKVSKLKITAPDESPNTDGMHFSNATNVDMSDCVIGTGDDCISIGTGSKNMLFQRIQ
CGPGHGLSVGSLGKRPDELPVGNITFLNCSLTGTTNGARIKSYHDSPELTADHIIYKDII
MDNVKNPILIDQHYDSKTKKEQSNVKITDVHFINIKGTTISKVPILLNCSSKYPCDNIEL
ADIDLKPVPPLTESSSECVSTTNLKVTGTIIPPAPTACTVP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagacatgttttctctgtttattggttagccatgttatgctgggaattgatggt
gcccccaaaggccgcattctgcagggcgaggccgttttcgatatcacaaactacggagct
aagggcgatggcacaacagatgatgcaatggcattgattcaggcatggagggcgggatgc
gatggtactggggcagctaggattctagtcccggccgggaaatcgttcatgatgggagag
gtgatcttgagtgggccatgcaaggcggtgaagccgattgtcctcgacatccagggcacc
ctcaacgccaatccggaccccagctcctattccaacatgatgtggatcttgatagaacat
gtcgacggcatgattgtcactggtggaggcaccatccacgggcaaggacaaaatgtttgg
aagtatgctgacgaggggaaccgtatgcccgttagttttacattccaatcatcccaaaac
ggagacataaacaacctaaatttcgtggatgcaatgggattccataccaaattgatcgac
agcatcgacttgaaggtgagcaagttgaagatcaccgctcccgacgagagccccaacacc
gacggaatgcactttagcaatgccacgaacgtcgacatgtccgattgcgtcattgggacc
ggggacgactgcatctccatcgggactggtagcaagaacatgttgttccagcgaatccaa
tgcggccccggacacggactctctgtggggagcttgggcaagcggcctgacgaattgccc
gtcgggaacatcaccttcctcaactgcagcctgacggggaccacaaacggcgcgaggatc
aagagctaccacgactcgcccgagctcaccgctgaccatatcatatacaaagacatcata
atggataacgtcaagaaccccatcctcatcgatcaacattacgactccaagaccaagaaa
gagcaatcgaacgtgaagatcactgacgtccacttcataaacataaagggcacgaccatc
tcgaaagttccaattctattgaactgcagctcaaagtatccatgcgacaacattgaattg
gccgacattgacttgaaaccggtgcctccgttgaccgagagctcgtcggagtgcgtcagc
actaccaacttgaaagtcaccggcaccataatcccgccagctccgactgcttgtactgtc
ccttag
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