Salvia splendens (scarlet sage): 121747618
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Entry
121747618 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121747618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121747618
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121747618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121747618
NCBI-ProteinID:
XP_041997618
LinkDB
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Position
9:30283752..30287665
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AA seq
496 aa
AA seq
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MEVDQGKLFMGGISWETNEDRLKDYFETYGDVVEAVIMRDRTTGRARGFGFVVFADPAVA
ERVVKEKHMIDGRTVEAKKAVPRDDQLLINRNSGSMQGSPGPGRTKKIFVGGLASTVTEN
DFKTYFDRFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDMVLHKTFHELNGKMVEVKR
AVPKELSPGPSRSPLVGYNYGFTRPNNFLNNYAQGYNLSPVGGYGVRMDGRYSHLASGQA
GFSHFGSPAYGLGVNMEQGLGGGFGAGSNFNSNLGYGRVLNPYFASNQSRYNTPIGFNTS
NSRGESFPNSSPRSVWGNGGLNASPNSAGSASYFGSGSGGFGVFGNNGTNWGTSPVAGSL
GGSSSGYNGGNFVYRGGDNNYSAGAGGFGRNTGTVIRLGKLHLLSLIILIRLAMGLETQK
MLPLKILRIMWLDMTFQLGNPVEGLLLRKLQWYEDNVGDEIFEKLRVVNFVRIPHRYTQT
DIYISCHYRELTGMLG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatcaaggtaagctctttatgggtgggatttcttgggaaacgaatgaggat
cgtcttaaagattattttgaaacatatggggatgttgtggaggcagtgatcatgagagac
cgaaccacaggtcgtgctcgtggctttggctttgttgtctttgcagaccctgctgttgct
gagagggtggttaaggagaagcacatgattgatggacgaactgtggaagccaaaaaagct
gttcctagagatgaccagctccttataaaccgaaacagtggcagcatgcaaggttcacca
ggacctggacgcactaaaaagatatttgtaggaggattagcatctacagtcactgagaat
gattttaaaacttattttgataggtttggtaccataacagatgttgtggtgatgtatgac
cacaatacgcagagaccaagaggttttgggtttataacatatgattcggaggaggcagta
gatatggtgttgcataaaacttttcatgaactcaatggtaaaatggttgaggtaaagcga
gcagttcccaaagaattgtcaccgggacccagccggagcccacttgttggttataactac
gggtttactagacccaacaatttcctgaataactatgcccagggatataatcttagccca
gttggaggttatggagttaggatggatggtagatatagtcatctagctagtggtcaagct
ggtttctcacatttcggttctcctgcatatggacttggtgtcaatatggagcaaggtttg
ggtggtggctttggagcgggttctaacttcaacagcaatctaggttatggccgtgttctg
aacccgtattttgccagtaaccagagcaggtacaacacaccaattggtttcaatacaagt
aacagcagaggtgaatcttttccaaactcttcacctagaagtgtatggggaaacggtgga
cttaatgcttccccaaatagtgccggttctgcttcatactttggttctggaagtggtggt
ttcggagtctttggaaacaatggaacgaactggggtacttcccctgttgctgggtccctc
ggtggaagctcttctggctacaatggtggaaactttgtctacagaggtggagataataat
tattctgcgggagcaggaggatttggaagaaacactggaacagtgatccgacttggcaaa
ctgcatcttctgagcttgataattctaattcgtttggctatgggcttggaaacgcagaag
atgttgccgctaaagattctgaggattatgtggttggatatgaccttccaactaggcaat
ccagtagagggattgctgcttaggaaacttcagtggtatgaagataatgtaggagatgag
atttttgagaagttgcgggttgtgaatttcgtacgtatccctcacaggtatacacaaaca
gatatatatatctcatgtcattacagagaactaacagggatgttgggttga
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