Salvia splendens (scarlet sage): 121747764
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Entry
121747764 CDS
T07627
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121747764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121747764
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121747764
mRNA cycle factors
Common to processing body (P body) and stress granule
121747764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
121747764
NCBI-ProteinID:
XP_041997795
LinkDB
All DBs
Position
9:18294885..18301316
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AA seq
985 aa
AA seq
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MTLLMDNAKENPSRERVQQLFNKNVELENKRRKAAQARIPSDPNTWQNMRENYEAILLED
HAFSEQHDIEYALWQLHYRRIEELRALFAAAASAGSPAPQNGKGTLRAVPDRLTKIRTQF
KTFLSEATGFYHDLMLKIRSKYGLPLGHSSDDPENQIPVSKDGNKSPEGKKGLMSCHRCL
IYLGDLARYKSLYGEWDSKARDFAAASSYYLQASSIWPSSGNPHHQLAILAGYSNDELLS
IYRYFRSLAVDIPFVTARDNLIIAFEKNRQNYSQILGDGKAPSVKMSPARLPGKGKGKGE
PRPALKENKPVASAMKERAPNKSELFKAFITKFVRLNGILFTRTSLEIFPEAFSMVKSDL
LELLSSGADDELNFGSDAAECRLAIIRMIAVLIFTVHNVSREGENQSYADILQRTVLLQN
AFTAAFEFVGSILERCSHLTDPSLSYLLPGIMVFVEWLACRQDFAVGSELEEKQVKARSF
FWNKCIIFLNKLLSSGLVSINEDEDETCFSNMSKYDESETANCLALPEDFELRGFHPLLP
AQLILDFSRKHLFGGDGGSKERIARVKRIIAAGKALANVVRVGPDGVYFDDQMKKFVFGV
ESQISDDLSLPSHLEPNVNVNSLDISSKGRMALAALPKIVVGAEADDEDDEVIVFKPPTT
ERHMDEFSLKLTSPGISASVGEASKVDFGNEKGSPSAVQDGFLLQSAVTAGMKSSAPGFN
TVANGTTQYPQPIQPSTSMWSANHSPIANGFSQMNLMENGVKSDLQDKFGLYQHAPVSLP
YPQFINAGPSNYYPVMNPQASVPSKFDSILTSGSFVDGLSAKPSLVMPTGSKKNPVSRPV
RHIGPPPGFGSVPSKVVDEALFNSMPQNEISIPQTDDYSWLDGYQLSSSNQGVGLSNSGN
HVVPAFPSVSNINGLMGTANFPFPGKQVPIQVLSNNQKGWQDHPFSEHMLHYEEQQKEFQ
KGNQQLGLPQQQYQGQSLWESRFFV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgctgatggataacgccaaagaaaatccttctagagagcgtgttcaacaactt
ttcaacaagaatgttgagttggagaacaagcgaaggaaagcagcgcaggccagaatccct
tcagatcctaacacatggcagaatatgcgtgaaaattatgaagcaattctccttgaagac
catgctttttctgaacaacatgatatagaatatgctctatggcaattgcattataggagg
attgaggagctaagggctctctttgctgcagcggcttcggcaggatcacctgcaccccaa
aatggtaaagggacacttcgtgcggtaccagatcgacttacaaagatccgtactcagttt
aagacattcctctctgaggctactggattttatcatgatttgatgttgaagataagatct
aagtatggactcccattgggacattcttctgatgatccagaaaatcagatcccagtgtca
aaagatggaaataaatctccagaggggaaaaaaggtttgatgtcatgtcatcgctgtctg
atctatttgggtgatcttgctcgttacaaaagcctatatggagaatgggattctaaagcc
cgggattttgcagcagcatcaagctattatttgcaagcttcctcaatatggccttcaagt
ggtaatccacatcatcagcttgccatactggctggatattcaaatgatgaactgctgtcg
atatatcgctattttcgaagtctagctgtggatatcccatttgtaactgcaagagacaac
ttaatcattgcgtttgagaagaatcgtcagaattactcccagatacttggtgatggtaaa
gctccttctgtgaagatgtcgcctgcaaggttgcctggaaagggaaaaggcaaaggcgaa
ccaaggcctgccttgaaggaaaataagccagtagctagtgcaatgaaggaaagagctcca
aataagtctgaactcttcaaagcttttattacaaagtttgttaggttgaatggcattctc
ttcacgcgcacgagcctcgaaatctttcctgaagcattctctatggttaaaagtgattta
ttggaacttctttccagtggggctgatgacgagctcaactttggttcagatgcagctgag
tgtaggcttgcaatcattagaatgattgcggtcctaatattcactgtgcataatgtgagc
agggaaggtgaaaaccaatcctatgctgacattctacaacgcactgtcctgcttcaaaat
gcttttactgctgcatttgaatttgtgggcagcattcttgagcggtgcagccatttaact
gatccctcattaagctatttgctacctgggattatggtgtttgtagagtggttggcgtgt
cgtcaggattttgctgttggcagtgaattggaggaaaaacaagttaaagcaagatctttt
ttctggaataaatgcatcatatttctgaataagctcttgtctagtggcctcgtgtcgatt
aatgaagatgaagatgagacatgtttctcaaatatgagcaagtatgatgagagtgaaact
gctaattgccttgcattacctgaagattttgagttgagaggattccatcctctgcttcct
gctcaactcatccttgatttttcaaggaagcacttatttggaggtgatggaggcagcaaa
gagaggattgcacgtgtaaagaggattatagcagctggaaaggctcttgctaatgttgtt
cgagttggccctgatggagtatatttcgatgatcagatgaaaaagtttgtctttggtgtt
gaatctcagatttctgatgatctttcgcttcccagtcatttggaacctaatgtgaatgtt
aactcgctagatatttcatcgaaaggtcgaatggctctggctgctctgccaaagatagtg
gtgggtgcggaagcggatgatgaagatgacgaggtgattgtatttaagcctccaactact
gaaaggcatatggatgagttctctctgaaattgacttctccagggatttctgcctctgtt
ggtgaggctagcaaggttgattttgggaatgaaaagggatctccctctgctgtgcaagat
gggttcctcttacagagtgcggtgactgcaggcatgaaatcttctgcacccggatttaac
actgttgctaatggaactactcagtatccgcaacccatccaacccagcacatcgatgtgg
tcagcaaatcactcgcctattgcaaatggtttttcccagatgaacttgatggaaaatgga
gtgaaatctgatctgcaagataagtttggactttatcagcatgcacctgtttccttgcct
tacccccaatttatcaatgctggtcctagcaattactatcctgttatgaatccacaagct
agtgtgccgtctaagtttgactctatcctaacttctggttcattcgttgatggcctgagc
gccaaaccatcattggtcatgccgactggctcaaaaaagaatccagtgagtcgacctgtt
agacacatcggtccaccacctggttttggctctgttccttccaaggttgtggatgaagca
ttgttcaacagcatgccccagaatgaaatttcaattcctcaaacagatgattacagctgg
cttgatggctatcagctgtcttcatccaatcaaggtgttgggttaagcaattctgggaat
catgtcgtccctgcattcccttctgtgagcaatattaatggcttaatgggaactgctaat
ttccctttccctgggaagcaggtgccgatacaagtcctgagtaataatcagaaaggctgg
caggaccatcccttttcagaacatatgctgcactatgaggagcagcagaaagaatttcag
aaaggaaaccaacaacttggcttgccacagcagcagtatcaaggacagtcactttgggaa
agtcgtttctttgtgtga
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