Salvia splendens (scarlet sage): 121747771
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Entry
121747771 CDS
T07627
Name
(RefSeq) chromatin-remodeling ATPase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121747771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121747771
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
121747771
INO80 complex (yeast)
121747771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121747771
NCBI-ProteinID:
XP_041997815
LinkDB
All DBs
Position
9:complement(18002488..18014909)
Genome browser
AA seq
1508 aa
AA seq
DB search
MDSKRKYTYGNLFNLEPLMNFQLPKQDEDFDYYGNSSQDESRGSQGGALGDMNGTMSERG
SKMKRRSAYSSDEEGTGSYSSYISEERYRAMLGDHIQKYKRRLNYAPQNPGQTRTGTMAI
KSNVALKDQKPMNDNRGGFPKFESTSDFLNSSSSQKLGNYPESDFGQQYGASRPNLEPAF
LDIGDAITYRIPLPFEKLSSSLSLPSMSDIQVEEFYLKGTLDLGSLAAMMASDNKFQHGS
RAGMGDQRPQYESLQARLRAQQTNNYAENFCLSISETALGSDGIPEGAAGRIRRSILSEG
GILQVYYVKVLEKGDTYEIIERGLPKKAKVKKDPSAIEREEMEKFSKYWVNIARKEIPKH
HRIFTNFHRKQIIDAKRVSETCQREVKMKVSRSLKLMRGAGIRTRKLARDMLVFWKRVDK
EMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKASEPSGALAV
GDEKSDDQEILSDQLPEEEDPEAAELRREALRAAHDAVSKQKKMTSAFDNECLKLRLAGE
AEVPLQDGLVTESSNIDLLHPSTMPVGSTVQTPVMFKGSLKEYQLKGLQWLVNCYEQGLN
GILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPY
WGGLQERTVLRKNINPKHLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIK
SSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIE
SHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTGKTEVTVHCKLSSRQQAFYQAI
KNKISLAELFDGNRGHLSEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFHFGDVPNSL
PPPPFGELEDVFYSGGRSPITYEIPKLVYQETVGGFKAHNSEAGQCLSRESIQKLFNTFS
PENISSSSLQKDCGRSGTFEFSRFIDLSPAELSFLATGSFMERLLFSIMRSDRQYLDEIL
DLLMESDNGDVHDIQHAHIGKEKARAVMRMLLLPSRSEKSVLRRKLATGPLDAPFEALII
PYQDRLLSDIKLVHSVYSFIPRTRAPPINVRCSDRNFAYKMVQEWHDPWLKRLLTGFART
SDYNGPRKPIGTHPLIQEIDAELPITQPALQLTYKIFGSCPPMQPFDPAKMLTDSGKLQT
LDMLLKRLRAQNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQH
RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLI
CKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEHKLKEVSQQA
KDRQKKKSGAKGIRIDAEGAVSLEDFANAELQDNDFEPPDPEKTKSSSKKRKPAGDKQTQ
PKARAQKSSKQVDSSSPNQTIADYEHEDPSLLADSRQQRPKRLKRPTKSVNENIEPAFTA
IQHQSSEL
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggactccaagaggaagtatacatacggaaatctcttcaatcttgagcctttgatgaac
tttcaactgccgaaacaagatgaagattttgattattatgggaatagtagtcaggatgag
agcagaggtagccaagggggagcgttaggcgacatgaatggaacaatgtcggagagggga
tcaaaaatgaagaggcggagtgcttatagtagtgacgaggaaggaacaggcagttacagt
tcatatatttcagaggagcgatatcgtgcaatgcttggagatcatattcagaagtacaaa
aggaggctcaactatgccccccaaaatccaggacagacaagaactgggactatggcaatc
aaaagtaatgtggcccttaaagatcagaaaccaatgaatgataacagggggggatttccc
aagtttgaatcgacttcggattttctaaacagtagtagttctcaaaaactaggaaattat
cctgaatcagattttgggcagcaatacggtgcttccagaccaaatcttgaaccagctttt
ctggatataggggatgccattacatataggattcctcttccctttgaaaagctgtcatcg
tcactaagtttgccaagtatgtcagatatccaagtggaggaattttacctaaagggcacc
cttgacttgggttcattagctgcaatgatggcttctgataacaagtttcagcatggaagc
agggcagggatgggtgaccaacggcctcagtacgaatcacttcaggctagattgagagcc
cagcagaccaataattatgctgagaatttctgtctaagcatcagtgaaacagcattggga
agtgatggcattcccgaaggggcagctggaaggattaggcgatctatattgtcagaaggt
ggtatattgcaggtgtattatgtaaaagttttggagaagggggatacttatgagatcatt
gaacgtggtttacccaagaaggcaaaggtgaagaaagacccttctgcaattgagagggaa
gaaatggaaaagttcagtaaatattgggttaatatagcaagaaaagaaattccaaaacat
cacaggattttcactaatttccacagaaagcaaattattgatgctaagagagtttctgaa
acctgtcaaagagaggtgaaaatgaaagtcagcaggtctctcaaattgatgaggggtgct
ggaatcaggacaaggaaactggctagagacatgctagtgttttggaagagagttgacaag
gagatggcggaagtgaggaaaagagaagaaaaagaagctgctgaagctctgaagcgtgaa
caagaacttcgtgaagctaagaggcagcagcagaggctcaattttctgttgtcacagaca
gaactttacagtcacttcatgcagaataaggcctcagaaccctcgggagcattagcagtg
ggtgatgaaaaatctgatgaccaagaaattctttcagatcagctgccggaggaagaggat
cctgaagctgctgaattaagaagggaagctctcagagcagctcatgatgcagtttcaaag
cagaagaaaatgacaagtgcatttgataacgaatgcttaaagctacgtctagctggagaa
gctgaggtccctctccaagatggcttggtcaccgagtctagcaatattgatttgctgcac
ccgtcaaccatgcctgtaggatcaacagttcagacgcctgtgatgttcaagggttccctt
aaagaatatcaactgaaaggccttcagtggcttgtaaattgttacgagcagggattaaat
ggtattctcgctgatgaaatgggtctgggaaagacaattcaagctatggcattcttggct
catttggccgaggaaaaaaatatatgggggccttttctggtggttgcacctgcttctgtc
ttgaacaattgggctgatgaaatcagccgtttctgtcctgacttgaagactcttccatat
tggggtggtcttcaggagcgtacagtgcttaggaagaacatcaacccaaagcatctttat
cgaagggaggctggatttcacattctcatcaccagttaccagctgctggtttctgacgag
aagtactttcgccgtgtgaaatggcaatacatggtgttggatgaagcccaggcaatcaaa
agttccaacagtataagatggaaaacactgctcagctttaattgccgaaaccgcttgctt
ctgactggaactcctattcaaaataacatggctgaactgtgggcactcttacattttatt
atgccaactttatttgatagccatgaacaattcaatgaatggttttcaaaaggaattgag
agtcatgcagaacatggtgggacattaaacgagcaccagcttaatcgattgcatgccatt
ctgaaacctttcatgctgaggagagttaagaaggatgtggtctctgagttgacaggaaaa
accgaagttaccgtacactgtaaattaagttctcggcagcaagctttttaccaagctata
aagaacaagatatcccttgcagagttgtttgacggaaaccgtggacatcttagtgagaaa
aagattctgaacctgatgaacattgtcatccagctcagaaaggtatgcaatcatccagaa
ttgtttgagagaaacgaaggaagcacgtattttcattttggagatgttccgaattctctt
ccccctccccccttcggcgagctggaagatgtcttttactctggtggcagaagccctatt
acttacgagataccaaaactagtctaccaagagactgttggtggtttcaaggctcacaac
tcagaagctggtcagtgtttaagcagggagtcaattcagaagttatttaacacattctca
ccagaaaatatctccagttcttcactccaaaaggattgtggacgaagtggaacatttgaa
ttctcccgctttattgatctatcaccagcagaattgtcattcttggcaactggttctttt
atggagaggttattattctccattatgagatcagatcggcaatatttagatgaaattttg
gacctgttgatggaaagtgataatggcgatgtccatgatatccagcatgctcatattggc
aaggaaaaagcgagagctgtcatgcgaatgttgctactgcctagtaggtcggaaaaaagt
gttcttagaagaaagcttgcaacaggtcctttggatgctccattcgaggctctaatcatt
ccttaccaggacagacttctatctgatatcaagcttgtgcattcagtatactcgttcatc
cctagaactagagcacctccaataaatgtccgctgttctgatagaaactttgcatacaag
atggttcaagagtggcacgacccctggttaaagaggttgttaactggatttgcacgaaca
tctgattataatggcccaaggaaaccaattggcactcaccctttaatacaagagattgat
gctgaattaccaatcactcaacctgcacttcagcttacttacaagatcttcgggtcctgt
ccacccatgcaaccatttgaccctgcaaaaatgttgacagattctggcaagcttcaaacg
cttgatatgcttttaaagcgtctacgggctcaaaatcatcgtgttcttctttttgcacaa
atgacaaaaatgctgaatatccttgaggattatatgaactatagaaaataccggtatttg
aggcttgatggttcatccacaataatggatcgccgtgacatggtgaaagatttccagcac
cggagtgatatctttgtgttcttgctgagcacaagagctggtgggcttggaatcaacttg
acagctgctgacactgtcatattttatgaaagtgactggaatccaacattggatctgcag
gcaatggatcgggctcatcgtctgggtcaaactaaggatgtaactgtttaccgcttaatc
tgtaaagagacggtagaggaaaaaattcttcagagagcgagtcagaaaaacacagtccag
cagcttgtgatgacgggtggtcatgtccaaggagaccttttggctcctgaagacgtcgta
tcattattgatcgatgatgctcaactggagcataaactaaaagaagtttcacaacaggca
aaagataggcagaagaagaaaagtggtgctaagggcatcagaatcgatgcagaaggagct
gtgtctttagaggattttgctaacgcggagttacaggacaatgactttgaacctccagat
cccgaaaaaacaaaatccagcagcaaaaagaggaaacctgccggggacaagcaaacacag
ccgaaagcaagggctcagaagagctcaaaacaggtggattcatcatcaccaaatcaaaca
atagcagactacgaacatgaggatccctcgctgcttgctgactccagacagcaaagacca
aagagattgaaaaggccaacaaagagtgtgaatgagaacattgaacctgcgttcacagct
atccaacaccagagctcagaactgtag
DBGET
integrated database retrieval system
