Salvia splendens (scarlet sage): 121747889
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Entry
121747889 CDS
T07627
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121747889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121747889
03051 Proteasome [BR:
sspl03051
]
121747889
Membrane trafficking [BR:
sspl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121747889
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121747889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
XPC-binding
UBA_NBR1_C
Dsc3_N
Rad60-SLD_2
UBA_HOIP
RPN13_C
Motif
Other DBs
NCBI-GeneID:
121747889
NCBI-ProteinID:
XP_041997968
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All DBs
Position
9:17032760..17037350
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AA seq
542 aa
AA seq
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MAAEADSSTGVAAIEEVNVNIRCSNGSKFSVKTNLESTVAEFKGVLAQNCDVPADQQRLI
YKGRILKDDQTLVSYGLQADHTIHMVRGSAPAAAPSPAPVPTGPGNTTTTPAATQGGGPN
PGGTGLAGTGASLFPGLGLGGLGGTGGASGGLFGAGLPEFEQVQQQLTQNPNMMRDIMNM
PAIQSLMNNPEIMRSLIMSNPQMREIIDRNPELAHILNDPSVLRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTIGGNAATDAGSNPFAALLGNQGGI
QTRDGANSTTATETGTAVPNANPLPNPWSNTGGSQTLNATRTNPTGDARPPPTTGLGGLG
LPDLGSTGLGDPAAYSQLLQNPAVSQMMQSLLSNPQYMEQIMGMNPQLRSMLDMNPQLRE
MMQNPELLRQLTSSDMMQQMMALQQQLTRQQSTPEGDQTNQNRGPQNNMGLDMLMNMFGG
LGAGGFTVPNAPDVPPEELYATQLSQLQEMGFFDTQENIRALRATSGNVHAAVERLLGNL
GQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaggcggactccagcacgggggttgcggcgattgaggaggtgaacgtaaac
atccgatgctcaaacggctctaaattttcggtgaaaacgaacctcgaatcgacggtggcg
gaattcaaaggtgttttggcgcagaattgcgatgtgccagctgatcaacagcggttgatc
tacaagggccggatcttgaaggatgaccaaaccctagtcagctatggtttgcaggcagat
cacactattcacatggttcgtggttctgcaccagctgctgcaccttctcctgctccggtt
cctactggtcctgggaacaccaccactactcctgctgccacacaaggtggtggtccgaat
cctgggggtactgggttggctggtacgggtgcatccttatttccagggcttggcttaggt
ggactaggtggtactggaggggcatctggtggattatttggagctggacttccagaattt
gaacaggtgcagcaacaactaactcagaatcctaacatgatgagggacataatgaacatg
cctgccattcagagcttgatgaacaaccctgagattatgcgcagcctaattatgagtaac
cctcaaatgcgtgagataattgatcggaaccccgaacttgctcacattctgaatgatcct
agtgtccttcggcaaacattagaagcagcaaggaaccctgagctaatgcgcgaaatgatg
agaaacactgacagggcaatgagcaacattgaatcatctcctgagggattcaacatgctt
aggcgcatgtatgaaaatgtacaagaacccttcctgaatgctacaaccataggtggtaat
gctgcgactgatgctggatcgaatccatttgctgcactcctggggaaccaagggggcata
caaactagagatggagctaattcaacaactgcaactgaaacaggaacagctgttccaaat
gctaacccacttcctaatccatggagcaatactggaggttctcaaacattgaatgctacc
agaactaatccaactggcgatgcgaggccacctccaactaccggactgggaggacttgga
cttcctgatttagggagtacaggcttgggtgatcctgctgcatacagtcagttgttgcaa
aatccggctgtgtcacagatgatgcagagcttgctttccaaccctcagtacatggaacaa
attatgggcatgaaccctcaactacgcagcatgcttgacatgaaccctcaattgagagaa
atgatgcaaaacccagaacttcttcgacagttgacttcgtctgatatgatgcagcaaatg
atggctttgcagcaacaacttactcggcagcagtcaactccggaaggagaccagactaat
caaaatagaggaccacaaaacaatatgggtttggacatgctgatgaatatgtttggtgga
ctaggagctggaggcttcactgttcctaatgcccctgacgtgcccccagaagaactgtat
gcaactcagctatcacaactccaagagatgggtttcttcgacactcaagagaacatcaga
gcactccgcgccacctcaggaaacgttcacgcagctgttgaacgacttctaggaaacctc
gggcaatag
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