Salvia splendens (scarlet sage): 121747897
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Entry
121747897 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121747897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121747897
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121747897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RNA_bind
SET_assoc
RBD_RDR6
RRM_5
DUF2129
Motif
Other DBs
NCBI-GeneID:
121747897
NCBI-ProteinID:
XP_041997976
LinkDB
All DBs
Position
9:1413196..1415374
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AA seq
300 aa
AA seq
DB search
MWPVFCRNYECQTQQSDLDRLFSRYGKIVRIEMKSEYAFVYFEDENDAAKAIRELQGKPF
GSQRLRLHVKWAVGKRRGHHGDLESNPRPSRTLFVKHFDPVRTQNRDIEKHFEPYGRVLN
VRMSGDVAFVHFETQEDATRALELSQNSMLFDTVPRVEYAFKEYDARHRRKKRKRRNYAS
SRLPSPAYRHRRASPVYDRHAGPSNPRARSPKRLLRASPVYDRYEGPTNPRARSPKRVLR
ASPVYDRYEGPTNPRARSPKRVLRASPVYDRYEGPTNPRARSPDRARARSCAKVETVMRK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtggccggtgttttgccgcaactatgagtgccagactcaacagtcggacttggaccgt
ttgttctccagatacggaaaaattgtgcgtattgaaatgaaatcagaatatgcttttgtc
tattttgaggatgaaaatgatgcggcaaaggccatccgagaacttcaaggcaagccattt
gggtctcaaagactcagattacatgttaaatgggccgtgggtaagcgtcgtgggcatcat
ggtgatttagaatcaaatccaaggccatctagaaccctttttgtgaaacactttgaccct
gttcgtactcaaaatcgtgacattgaaaaacacttcgagccttatgggagggttcttaat
gtgcgtatgtctggggatgttgcttttgtgcatttcgaaactcaggaagatgccacaaga
gccctggagctctcccagaatagtatgttatttgatacagttcctcgtgttgagtatgct
tttaaggaatatgatgctaggcacagaagaaagaagcgaaagcgtagaaattatgcttcc
tcgaggttacctagtccagcataccgccacagacgagcaagtcctgtttatgataggcac
gctggtccttcaaatccaagggccaggagtcctaaacgtttgctgcgagcaagtcctgtt
tatgataggtacgagggtcctacaaatccaagggccaggagtcctaaacgtgttctgcga
gcaagtcctgtttatgataggtacgagggtcctacaaatccaagggccaggagtcctaaa
cgtgtgctgcgagcaagtcctgtttatgataggtacgagggtcctacaaatccaagggct
aggagtcctgatcgtgcgcgagcaaggtcctgtgcgaaggtcgagacagtgatgaggaag
tag
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