Salvia splendens (scarlet sage): 121748033
Help
Entry
121748033 CDS
T07627
Name
(RefSeq) squalene synthase 1-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00100
Steroid biosynthesis
sspl00909
Sesquiterpenoid and triterpenoid biosynthesis
sspl01100
Metabolic pathways
sspl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121748033
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
121748033
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sspl01006
]
121748033
Enzymes [BR:
sspl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121748033
Prenyltransferases [BR:
sspl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121748033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
121748033
NCBI-ProteinID:
XP_041998180
LinkDB
All DBs
Position
9:15451473..15457402
Genome browser
AA seq
413 aa
AA seq
DB search
MGSLRAILRHPDDLYPLLKLKFAARNAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLVT
DLRDAICIFYLVLRALDTVEDDTSIATELKVPILMAFHRHIYDREWHFSCGTKEYRVLMD
QFHHVSTAFLELAPGYQEAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLATDELSNSMGLFLQNTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKSEENSVKAVQCQNDMVTNALVHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKIVDRTKTMSDVYGAFYDFSRMLKFKVDNNDPNAGTTNDRL
DIILKICRNSGTLNERKSYIIESGPQYNAAYMVAIFFIVLAILQAYFAPKKAV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttacgtgcgattttgaggcatccggatgatttgtatccattgctgaagctg
aaatttgcggcgaggaatgcggagaagcagataccgccggagccacactggggattttgt
tacaccatgcttcacaaggtttctagaagtttcggtctcgttattcagcagctcgttacc
gatcttcgtgatgctatttgcattttctatttggttcttagagcacttgacactgttgag
gatgatactagcatagcaacagagctcaaagtacctattctgatggctttccatcgtcac
atatatgaccgagaatggcatttttcatgtggtacaaaggagtacagagttctaatggac
cagttccatcatgtttccactgcctttctggagcttgcacctggttatcaggaagcgatt
gaggatattaccatgagaatgggtgcagggatggcaaaatttatttgcaaggaggtagaa
accactgatgattatgatgaatattgtcattacgtggctggccttgttggattggggtta
tccaaactattccatgcttctggaaaagaagatcttgccacagatgaactgtccaattcc
atgggtttatttcttcagaacacaaacattatcagagattaccttgaggatatcaatgag
ataccaaagtcacgtatgttctggcctcgtcaaatatggagtaaatatgtgaacaaactt
gaggacttgaagagcgaggaaaactcagttaaagcagtgcagtgccaaaatgacatggtc
acaaatgctttagtgcacgtcgaagactgcctcaagtacatgtctgatttgagagatcca
gctatctttcgcttttgtgcaattccacagataatggcaattgggacattagctttatgc
tacaacaacattgaagtcttcagaggtgttgtaaaaatgagaagaggccttactgctaaa
attgtcgacagaaccaaaacaatgtctgatgtgtatggagctttttacgacttctctcgg
atgctgaaatttaaggttgacaacaatgatcctaatgcgggaacgacaaacgacagacta
gatattatattgaaaatttgcaggaactctggcaccttgaatgaaaggaaatcttacatt
attgagagtggcccccagtacaatgctgcttatatggttgctattttcttcatcgtacta
gcaattcttcaagcatacttcgcaccaaagaaagctgtctaa
DBGET
integrated database retrieval system