Salvia splendens (scarlet sage): 121748218
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Entry
121748218 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121748218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121748218
03009 Ribosome biogenesis [BR:
sspl03009
]
121748218
04131 Membrane trafficking [BR:
sspl04131
]
121748218
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121748218
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121748218
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121748218
Membrane trafficking [BR:
sspl04131
]
SNARE
SNARE associated proteins
Others
121748218
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121748218
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121748218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_33
CDC48_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
AAA_lid_PRS2_C
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
Vps4_C
NB-ARC
TsaE
ResIII
AAA_24
DUF815
Zeta_toxin
Sigma54_activat
SLFN-g3_helicase
Rad17
Zot
Motif
Other DBs
NCBI-GeneID:
121748218
NCBI-ProteinID:
XP_041998383
LinkDB
All DBs
Position
1:35124234..35139894
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AA seq
805 aa
AA seq
DB search
MSDQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVSLHPDTMEKLQLFRGD
TILIKGKKRKDTVCIALADDTCDEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVH
ILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRSVEFKIIETDPVEYCV
VAPDTEIFCEGEPIKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFVINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKARAHIIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
QDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSQGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDAALLRPGRLDQLIYIPLPDEESRLQI
FKACLRKSPIAKDVDLRVLAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRSDN
PEAMEEDVDDEVAEIRASHFEESMKYARRSVSDADIRKYQSFAQTLQQSRGFGSEFRFAD
NTSGSTAADPFAAPTATADDDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaacctgaatcatccgattctaagggtacaaagagggattttagcactgcg
atcttggagcggaaaaaggcgccgaatcggctggtggtggatgaggctgtcaacgatgat
aattcggtggtgtctcttcaccctgatacgatggagaagctccagcttttccgcggcgac
actatcttaatcaagggtaagaaaagaaaggatacagtgtgcattgcccttgctgatgat
acctgtgatgaaccaaagatccggatgaacaaggttgtgagaaataacttaagggttagg
cttggtgatgtggtctctgtgcatcagtgtgctgatgtgaagtatgggaagcgtgttcac
attcttcccattgatgacacagtcgaaggggttactggaaatctttttgatgcctaccta
aaaccatatttcctggaggcttatcgcccagtgagaaaaggtgacatgttccttgtcaga
ggtggaatgagaagtgtagagttcaaaattatcgaaactgatcctgtggagtactgtgta
gttgctcctgatactgagatcttttgtgagggagagcctattaaaagagaggatgagaat
cgcttggatgaggttggctatgatgacgttggtggcgtccgcaagcagatggctcagatt
cgtgaattggtagagctaccattaaggcacccccaactttttaaatcaattggtgtcaag
cctccaaaaggaatactgctctatggacctccaggatctggaaagaccttaattgcccga
gctgtggctaatgagacaggtgctttcttctttgttattaatggaccagaaattatgtca
aagttagctggagaaagtgaaagcaatctcaggaaggcatttgaagaagctgagaagaat
gcaccatccatcatattcattgatgaaattgattcaattgcgcccaagagggagaaaacc
aatggagaggttgagaggagaattgtttcccaactgttgacattgatggatggtcttaaa
gcccgtgcccatattattgtaattggtgctacaaaccgtcccaatagcatcgaccctgcc
cttaggaggtttggtaggtttgacagggagattgatattggtgttcctgatgaaattggg
cgtcttgaggtccttcgtatccacacaaagaacatgaagctcgccgaagatgttgatttg
gaaaggatttccaaggacacacatggctatgttggtgctgacttagctgcattgtgcact
gaggcagcccttcaatgcatcagggagaagatggatgtgattgatttggaagatgacact
attgatgcagagatactaaactccatggctgttaccaatgagcatttccagactgctctt
gggacaagcaatccctctgctttacgtgaaacagttgttgaagtacctaacgttagctgg
caagatattggaggccttgaaaatgtcaagcgcgaactccaagagactgttcaataccca
gtggagcatcctgagaagtttgaaaagtttggcatgtcaccttccaagggagtgcttttc
tatggccctcctggttgtggaaagactttgctggccaaggctattgcaaatgaatgtcag
gcaaacttcatcagtgttaagggccctgagttgctgactatgtggtttggagagagtgag
gccaatgttagagaaatttttgacaaggctcgtcagtctgccccttgtgttttgtttttt
gatgaattggactcaattgcaactcagagaggaagcagtcaaggagatgctggtggtgct
gctgaccgggtattgaatcagctcctgactgaaatggacggaatgaatgctaagaaaaca
gttttcattattggtgcgaccaacaggcctgatataattgacgctgctcttcttcgtcct
ggccgtcttgatcagctgatttatattcctctccctgatgaggaatcacgccttcagatt
ttcaaagcatgcctgagaaagtcgcctattgccaaagatgttgaccttagagtccttgct
aaatacactcaaggtttcagcggtgctgacattacagaaatctgccaacgcgcttgcaaa
tacgctatcagagagaacatcgagaaagatattgagaaggagaggagaagaagcgacaat
cctgaagctatggaggaagatgtggatgacgaagtagctgagatcagggctagtcacttt
gaggaatcaatgaagtatgctcggaggagtgtgagtgatgctgacattcgcaagtatcag
tcatttgctcagacgctgcagcaatcaagaggatttggttctgagttccggtttgctgac
aatactagtggctctactgcagctgatccttttgcagctcccaccgccacagccgatgat
gatgacctttataattag
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