Salvia splendens (scarlet sage): 121748277
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Entry
121748277 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121748277
03036 Chromosome and associated proteins [BR:
sspl03036
]
121748277
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121748277
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121748277
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121748277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
121748277
NCBI-ProteinID:
XP_041998455
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All DBs
Position
9:21500559..21505787
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AA seq
636 aa
AA seq
DB search
MQFGDGRAHEFSEEEEEEEEEEKMRFDNDSEREEDPNALTKFRISKALRETLKDKGIESL
FPIQAMTFNTILDGSDLVGRARTGQGKTLAFMLPILESLTNGPAKTSRKTGYGRPPSVLV
LLPTRELATQVFSDFEIYDGSLGLKCCCLYGGSPYQPQQIQLKRGADIVVGTPGRIKDHI
DRQTIDLSALKFRVLDEADEMLRMGFVEDVELILGKVEDASRVQTLLFSATLPEWVKHIA
AKFLKQDKKTTDLVGNEKMKASTNVRHIVLPCSGSARSQIIPDIIHCYSSGGRTIIFTET
KDSASTLAGLLPGARALHGDIQQATREVTLSGFRSGKFSTLVATNVAARGLDIDDVQLII
QCEPPRDVEAYIHRSGRTGRAGKTGIAVMLYDPRKSNFSKIERESGVKFEHMSAPQPADI
AKVAGAEAAEKIAEISDRVIPVFKDVAEELVKSSVLSPAELLAKALAKIAGYTEIKSRSL
LTSMENYVTVLLECGKPIYTPSFVYGVLRRFLPEEKVESIRGLSLTADGKGAVFDVATED
LDQFIAEPKNHSGVSLEVVKSLPQLQEREQVRGGGRFGGGGGVGGRGGGYSERRDGRLSS
GRGGGRGGFPDRRNDRFARGGGGGGGRGRANNNRRW
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcggagatggacgagcccatgaattcagtgaagaagaagaagaagaagaagaa
gaagaaaagatgaggttcgacaatgatagcgagagggaggaagatcctaatgcgctgacg
aaattccggatttccaaggcgttgagggagaccctcaaggacaagggaatcgagtccttg
tttccgattcaggccatgaccttcaataccattcttgatggttctgatttggtcggtagg
gcacgcactggtcagggtaaaacattggcttttatgttgcctatattggaatcgttgaca
aatgggccagcgaaaacatcaaggaagactggatatggaaggccaccaagtgttcttgtg
cttttacccactagggagctggccactcaggtgttttctgactttgagatatacgatgga
tcattagggttgaaatgttgttgtctgtatgggggttcgccataccagccacagcagatt
cagttgaaaagaggtgctgacatcgttgttggtacccctggtcgcattaaggatcacata
gatagacaaacgattgacttgagtgcactaaagtttcgtgtacttgatgaggctgatgaa
atgctgaggatgggttttgttgaagatgttgaacttatcttgggcaaggtagaggatgca
agtagagtccaaacacttctttttagtgctactttaccagaatgggtaaagcatattgca
gcaaaatttctaaaacaagataagaaaactacggatcttgttggaaatgagaagatgaag
gctagcaccaacgtgagacatattgttcttccctgctctggctctgccagatcgcaaatt
attcctgatattatccactgctatagtagtggaggccgcactattatctttacggagaca
aaggattctgcttccacactagctggattactacctggagcacgtgctttgcacggtgac
atacaacaggctacacgtgaggtcacactttctggattcagatccggaaaattttcaacc
cttgtggctacaaatgtagcggcacgtgggttagatattgatgacgtccagctaattatt
cagtgtgaaccacctcgcgatgtagaggcatacattcatcgctctggaagaacgggaaga
gcagggaaaactggcattgctgtaatgctttatgatccaaggaagtcaaacttttcaaag
atagaaagagaatctggggtgaaatttgaacatatgtcagctccacagccagcagatata
gctaaagttgctggtgcagaagctgctgagaaaatagctgagatatctgatagagtcata
cctgtatttaaggatgttgctgaagagctagtgaagtcatctgttctgtccccagcagag
ttgctagcaaaggcactggcgaaaattgctggctatactgaaattaagagtaggtcactt
ctcacttcaatggaaaactatgtcaccgttcttcttgagtgtggaaagcccatttacaca
ccttcctttgtctatggtgttctccgaagatttctacctgaagagaaagtcgaatcaatc
aggggcctttcgttgaccgctgatggcaagggtgcagtgtttgatgtggctactgaagat
ctggaccagtttattgctgagccgaaaaatcattctggggtaagcctggaggtcgtgaaa
tcattgccccaattgcaagaaagagagcaggtaagaggaggggggagatttggaggtgga
ggtggagttggagggcgtggtggtggttactcggagagacgagatggtaggttatccagt
ggaagaggaggcgggagaggaggatttccagatcggaggaatgatagattcgctagaggt
ggtggtggtggtggtggaagaggtcgcgcgaataacaaccgtagatggtga
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