Salvia splendens (scarlet sage): 121748334
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Entry
121748334 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121748334
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121748334
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Helicases
121748334
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ParD_antitoxin
AAA_19
P-loop_SecA
GARIL_Rab2_bd
SLAM
Motif
Other DBs
NCBI-GeneID:
121748334
NCBI-ProteinID:
XP_041998562
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All DBs
Position
1:35733999..35739193
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AA seq
528 aa
AA seq
DB search
MEKDTSFLFSGITFNRKKFAPDFARFQDKEEVDCATDEPALLENADPESEQVAAVRTDKK
RKRKATSDPVEGFSVFKSSKSKKAMDQMEETNEDKLLLGKKEYHRQLERDALFRKKHNIH
VSGSNIPSPLQSFTELKLRHNCKSYLLRNLGDLGFKEPTPIQRQAIPVLLSGRECFACAP
TGSGKTFAFVCPILMKLERASKDGIRAVILCPTRELAAQTTRECKKLVKGKKFYIKLMTK
QLTKSADFSKQPCDILISTPYRVHYAVRKRKLDLSKVEFLVLDEADKLFELGLVKQVDAV
VKACSNPSILRSLFSATLPDTVVELARTIMHDAVRIIIGRKNSASETIKQKLVFVGSEEG
KLLALRQSFAESLNPPVLIFVQNKERAKELYNELRYDDIRADVIHADLPEMQRENAVDNF
RSGKTWVLVATDVIARGMDFKGVNCVINYDFPESMAAYVHRIGRSGRAGRSGEAITLYTE
ADVPYLRNIANVMAASGCEVPAWIMALAKKKWRKYRPHREAISNKPQD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggacacctcttttctcttctccggtatcactttcaatcgcaaaaagttcgct
cctgatttcgccagatttcaggataaggaggaggttgactgcgcaacagatgaaccggct
ttgctcgaaaatgcggatcctgaaagcgagcaagttgcggcggtgcgtactgataagaag
agaaagagaaaagcaacttcggacccagttgaagggtttagtgtgttcaaaagttcaaaa
tcaaaaaaagcaatggatcaaatggaagaaaccaatgaagacaaacttcttcttgggaag
aaggaatatcaccgtcagttggagagggatgctcttttccggaagaagcataacattcat
gtttctgggagtaacatcccatcaccccttcagagcttcacagagttgaaattaaggcat
aactgcaaatcatatttattacgcaatctgggggatctgggttttaaagagccgacaccg
atccagaggcaggctattccagtcttgttatctggaagggagtgctttgcttgtgcacct
actggttctggaaaaacgtttgcatttgtctgcccaatcctcatgaaacttgagcgtgct
tcaaaggatggcattcgggcagtgatcctttgcccaacacgtgaattagcagctcagact
actcgagaatgcaaaaagttggttaaaggcaagaagttttacatcaagctaatgactaag
cagctcactaaaagtgctgatttttcaaagcagccttgtgacattctcatatcgacacct
tatagggtgcactatgcagttcgcaaaagaaagcttgatttgagcaaggtcgaatttctt
gtcctggatgaagctgacaagctttttgaattaggtttggtgaagcaggttgatgcagtg
gtgaaagcatgctcaaatccttcaatattgcgctctctatttagtgctactttacctgat
actgttgtagagctagcacgtacaattatgcatgatgcagttcgaataattatcggtcga
aagaattctgcttctgaaacaattaagcaaaagctcgtgtttgtaggaagtgaggaaggc
aagcttcttgctcttcgccaaagctttgctgagagtttgaaccccccggtgctaattttt
gtgcaaaacaaggagcgagctaaagaactctataatgaactgcgatatgatgatatcaga
gctgatgtcatacatgctgatcttccagaaatgcagagagaaaatgctgttgataatttt
cgatctgggaaaacatgggtattggttgccactgatgttattgcgcggggcatggacttc
aaaggcgtcaattgtgtaatcaactatgatttcccagaatctatggctgcatatgttcat
aggattgggcgttctgggagggctgggaggagcggagaagcaataactttgtatacggag
gctgatgtcccttatctacggaacatagcgaatgtaatggcagcttcggggtgtgaggtt
cctgcttggatcatggccttagccaagaaaaaatggaggaagtacaggcctcatagggaa
gccatttctaacaagcctcaagattaa
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