Salvia splendens (scarlet sage): 121748351
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Entry
121748351 CDS
T07627
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121748351
09122 Translation
03013 Nucleocytoplasmic transport
121748351
03015 mRNA surveillance pathway
121748351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121748351
03041 Spliceosome [BR:
sspl03041
]
121748351
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121748351
Spliceosome [BR:
sspl03041
]
Complex C
Other components
EJC/TREX
121748351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
121748351
NCBI-ProteinID:
XP_041998587
LinkDB
All DBs
Position
9:complement(6041145..6043542)
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AA seq
225 aa
AA seq
DB search
MAAHFPYSFAQLSFFLQNPPNLNLAKISSSMANAEAEALDFEPEEDDLMDEDVGDGSPNR
ATAPRLKSAITGGGSAPKKTKGRGFRDEAAAEADRNARMSAPFDSLDSEGGPGPERSIEG
WIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEFEKFEEAQRAIS
EMDGAELLTQIMNVDWAFSKGPFRRRNIRRRSPRGHRSRSPRRRF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccactttccctactcatttgcacaactctcgttttttctgcaaaatccccca
aatctaaacctagcaaaaatatcctcgtcaatggcgaatgcggaagcggaggccctcgat
ttcgagccggaggaggacgatcttatggacgaggacgtaggcgacggctcccccaaccga
gccaccgctcctcgcctgaagtccgccatcaccggcggcggctccgctccgaagaagacc
aagggccgcgggtttcgcgacgaggccgctgctgaagctgaccgcaatgctcgcatgtct
gcccccttcgattcgctcgattcagaaggcggccctggccccgaacgatctattgaagga
tggattattctggttactggagttcatgaagaggctcaagaggacgatctacaaaatgcg
tttggtgattttggagagataaagaatttacacttgaatcttgatcgtcgtacgggtttt
gtcaagggctatgctctaattgaatttgagaagtttgaggaggcacagagagccataagc
gagatggatggagctgaactcctaacccagatcatgaatgttgactgggcgttcagcaaa
ggtccattcagaagaaggaacatcaggaggagatcacctcggggccatcggtccaggagt
ccaaggaggagattctga
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