Salvia splendens (scarlet sage): 121748396
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Entry
121748396 CDS
T07627
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121748396
03036 Chromosome and associated proteins [BR:
sspl03036
]
121748396
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121748396
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121748396
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121748396
microRNA pathway
RISC loading complex
121748396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
121748396
NCBI-ProteinID:
XP_041998654
LinkDB
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Position
9:complement(22731578..22738463)
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AA seq
909 aa
AA seq
DB search
MDPSEHDGNGASETLPPPPPVPPNVTPIKAVTEPEVKKVFRAPMARRGFGTRGNKVPILT
NHFKVNVNNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLDRVHDTYDSELAGKDFAYDGE
KSLFTVGALPRNKLEFTVVLEDVTSSRNNGNSSPGAQGSPNESDKKRMRRPYQSKTFKVE
ISFAAKIPMQAIANALRGQESENSMEAFRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFA
DVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVADFLCANQNARDPFSLDWAK
AKRTLKNLRITTSPTNQEFKITGLSEKSCREQLFTLKQKSKDGDSEPVEVTVYDYFVKHR
NIDLRYSADLPCINVGKPKRPTYFPVELCSLVSLQRYTKALSTFQRSSLVEKSRQKPQER
MSVLSNALKINNYDAEPMLRSCGVTINSNFTQVEGRVLLPPKLKVANGDDLFTRNGRWNF
NNKKFVNACKIERWAVVNFSARCDVRGLIRDLMKVGESKGIAVEEPFDVFEESQQFRRAP
PLVRVDKMFEEVQSKLPGPPKFLLCLLPERKNCDLYGPWKRKNLSDFGVVTQCLAPMRIN
DQYLTNLLLKINAKLGGLNSMLAGEISPSIPVVSKSPTLILGMDVSHGSPGQSDIPSIAA
VVSSRQWPSISRYRACVRTQSPKLEMIDSLYKRVSDTEDDGIMRELLVDFYTSSGKRKPD
QIIIFRDGVSESQFNQVLNIELNQIIEACKFLDEKWNPKFVVIVAQKNHHTKFFLPNAPE
NVQPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQELVHSLSY
VYQRSTTAISVVAPICYAHLAATQLGQWMKFEDASETSSSHNGTGPAAAPPVPPMPKLQE
SVRNSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctgaacatgatggaaatggggcctcagagactcttcctcctccacctccg
gttcctccaaatgtaactcctataaaagctgttaccgaaccagaagtaaagaaagttttc
cgggccccaatggctagacgtggttttggaactagaggaaataaagttcctatcctgaca
aaccacttcaaagtgaatgtgaacaacgttgatgggcacttctttcactatagtgttgcc
cttttttatgaagatggccgccctgtagatggaaaaggtgttggtaggaaagtacttgac
cgagttcatgacacttatgattctgagttggctggcaaggattttgcttatgatggggaa
aagagtttgtttacagttggtgcacttcctcgtaataaacttgagtttactgttgtgctt
gaagatgttacttcaagtcggaacaatggaaatagcagtcccggggcacaaggaagtccc
aatgaaagtgataagaaaaggatgagacgtccgtatcaatccaaaacattcaaagtggag
ataagttttgctgctaaaattcctatgcaagccatagcaaatgctttgcgtggccaggaa
tctgaaaactctatggaggccttccgggttttggatatcatcttaaggcaacatgcagct
aagcagggttgtctgcttgttcgtcaatcattcttccataatgatccaaagaactttgcc
gatgttggaggcggggttcttggctgccgaggctttcattcaagcttcagaactacgcaa
agtggcttgtcgttgaatattgatgtatctacgaccatgatcatccagccagggcctgtt
gccgactttctgtgtgccaatcaaaatgcgagagacccgttctcacttgattgggcaaag
gccaaacgcactctcaagaatttgaggatcacaacaagtcctacaaaccaagagttcaaa
ataactgggttaagtgaaaagtcttgccgtgagcaattgttcacattaaagcaaaaaagt
aaggatggtgattctgaaccagtagaagtgactgtctatgattactttgtcaagcaccgt
aacattgacctgcgatattctgctgatctgccatgcattaatgttgggaagcctaaacga
ccaacatatttccctgttgagctatgttctctggtctcattgcaacgttatacaaaagct
ctgtcaactttccaacgctcatcattggttgagaaatcacggcaaaaaccccaggagagg
atgtctgtgctgagtaatgctttaaaaatcaacaactatgatgctgagcctatgcttcgt
tcttgtggtgttaccatcaatagtaactttactcaggttgaaggccgtgttcttcttcct
cctaagctgaaagttgcaaatggagatgatttgtttactcggaatgggagatggaacttc
aataataagaaatttgttaatgcttgcaagattgagcgctgggctgtagtaaacttttct
gctcgctgtgatgtacgtggcctgatcagagatttgatgaaagttggtgaatcaaaagga
atcgctgtggaagaaccatttgatgtttttgaagaaagtcagcagtttagacgagcccca
cccttggttagagtggataagatgtttgaagaggtgcagtctaagcttcctggcccacca
aaatttctactatgtttgcttccagaaagaaagaactgcgacttatatggtccatggaag
cgtaaaaacctgtctgattttggagttgttactcaatgcttggcacccatgaggatcaat
gatcagtatcttaccaatcttctgctgaagattaatgccaagcttggtgggctgaactct
atgttagctggtgagatatctccttcaataccggtggtatcaaagtctcccaccctgatt
cttggcatggatgtgtcgcatggctcacctggacaatcggatataccatcaattgctgct
gttgtcagctcaaggcagtggccttcaatttctcgctatagagcctgtgtgcgtacccaa
tcaccgaagcttgagatgattgattcgctatacaaacgtgtgtctgacactgaagatgat
ggaataatgagggagcttctggttgatttctatactagttctgggaaaaggaaacccgat
cagataatcatcttcagagatggtgtgagtgaatcccaatttaatcaggttctgaatatt
gaactcaaccaaattatagaggcctgcaagttccttgatgagaagtggaatccaaagttt
gtggtcattgttgcgcagaagaatcaccatactaaattttttctgcctaatgctcctgag
aatgtgcagccagggactattatagacaataaagtctgtcatcccaggaactatgacttc
tacttgtgtgcacacgccgggatgattggcacgactcggcctacacactaccatgtctta
ttggatgaggtgggcttttcaccagatgacttgcaagaactcgtccattccctgtcctat
gtgtatcagcgcagtactacggctatatctgttgtcgccccgatatgctatgcgcacttg
gcagccacccagttgggccagtggatgaagtttgaagacgcatcagagacgtcatccagc
cacaacgggaccgggccagctgctgctccaccagttcccccgatgcctaagttgcaggag
agtgtccgcaactctatgttcttctgctag
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