Salvia splendens (scarlet sage): 121748460
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Entry
121748460 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121748460
09124 Replication and repair
03420 Nucleotide excision repair
121748460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121748460
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121748460
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121748460
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121748460
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_RAD5A
UBA_3
Dsc3_N
NQRA_N
Motif
Other DBs
NCBI-GeneID:
121748460
NCBI-ProteinID:
XP_041998766
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Position
9:complement(9672525..9675991)
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AA seq
388 aa
AA seq
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MKIFVKTLKGTSFEIEVKPEDKVENVKRIIETTQGADVYPAALQMLIHQGKVLKDGTTLD
ENKIAENAFVVIMLSKNKVSQGEGSTTSSAPTVKAPRSGESQPTAAPVSTTPQPPVAVPS
PAPVSVPAPAAVPSPAPVTAANAVSDVYGQAASNVVSGNNLEGTIQQIIDMGGGIWDRDT
VVRALRAAFNNPERAIDYLYSGIPESAEAPAAPGGTAVNVPVQPQEAVQAAPDLASGPNA
DPLNLFPQGLPNMGPNAGGANTLEFLRNTPQFQALREMVQANPQILQPMLQELGKQNPQL
VRLIQDHQADFLRLINEPIEGDEGNVEGQLPGAMPQAVTVTPEEREAIERLESMGFDRAI
VLQVFFACNKNEELAANYLLDHIHEFEE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtgaagacgctcaagggcaccagcttcgaaatcgaagtgaaacccgaa
gacaaggttgagaatgtgaagagaatcatagaaactacgcagggagccgatgtttatcct
gcagcactgcaaatgcttatccatcaagggaaagttcttaaagatggcacaacacttgat
gagaataaaattgctgaaaatgcgtttgttgttattatgctgtcgaagaacaaggtctct
caaggtgaaggctcaacgacatcaagtgcacctactgtgaaggcgcccagatcaggtgaa
tcacagcctactgcagctccagtatcaacaacccctcaacctcctgtggctgtgccttca
cccgctcctgtttctgttccagctcctgctgctgttccttctcctgctcctgttacagct
gccaatgctgtgtcggatgtttacggacaagctgcatctaatgtagtatcaggtaataac
cttgagggtactatccagcagattattgatatgggtgggggaatttgggacagagacaca
gttgtgcgagctcttcgtgctgctttcaataacccagagagagcgattgattatttatac
tctgggatacctgaatcagctgaagcccctgctgcacctggtggaacggctgtcaatgtg
cctgtacaacctcaggaagctgtgcaagcagcacctgatcttgcctctggaccgaatgcg
gatccactaaatcttttcccacagggtctcccaaatatgggtccgaatgctggtggtgca
aacaccctagagtttctacgtaacactccacagttccaagcactgagggagatggtgcag
gccaaccctcaaatcttgcagcccatgcttcaagagctcggaaagcaaaatcctcaatta
gtgaggctgattcaagaccaccaagcagactttcttcgcctgatcaatgagccaatagaa
ggcgatgaaggcaatgtagaggggcagcttcccggagcaatgcctcaggccgtgacagtt
acaccagaggaacgcgaggctatagaacggcttgaatctatggggttcgaccgggcaata
gttcttcaagtgttcttcgcctgcaacaagaatgaggagctggctgcaaactacttgttg
gaccatatacatgagtttgaagagtga
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