Salvia splendens (scarlet sage): 121748500
Help
Entry
121748500 CDS
T07627
Name
(RefSeq) autophagy-related protein 18b-like
KO
K17908
autophagy-related protein 18
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121748500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121748500
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121748500
Membrane trafficking [BR:
sspl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121748500
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121748500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT80_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
121748500
NCBI-ProteinID:
XP_041998829
LinkDB
All DBs
Position
9:complement(11531609..11536317)
Genome browser
AA seq
390 aa
AA seq
DB search
MRSYSNRSKWSEVEGRIYKRLCFKPLGILPQMANQSSAHPILCASFNQDNSCFAIGTKDG
FKIFDCDTGRLLYERAIGAFVIVEMLYRTNLLAIVGAGEQPSLSPRRLCLFNIVNGTSLR
ELNFLTSILAVRMDRKRLIVLFKEQTYIYDVNSLEKKQIIDTVPNVQGLCAFSACVDNPY
LALPASTTKGSLLVYNVVDLQSHCEIDAHRSPLIAMAFSSNGTYIATASEHGTIIRVHLI
SDATKSYSFRRGTYSSTIFSLSFGPSADLPDILLATSSSGSVHIFSLGFDLNERKSNSLL
GSIIPGSVSDALDPAHHLVFHHAFSAGVRSNAVVQKIEKASGSSNPDPVVLRATISMISF
SGYYQEYSLRINNKNEATWTLERRSKAIAE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttattccaacagatcgaagtggagtgaagttgaaggaaggatttacaaacga
ctttgcttcaaaccgctcggaattctgccgcaaatggcgaaccaatcatctgctcatccg
attctctgcgcttccttcaaccaagacaacagctgctttgcaattggaaccaaagacggc
ttcaaaatcttcgactgtgataccggaagactcctctatgaacgagctattggtgcattc
gtcattgttgaaatgctatacaggacaaatcttctagccatagttggggctggtgaacag
ccttctttgtcaccaaggagattatgtttgttcaatatcgttaatggaacttcactcaga
gaactcaacttcttgacttctattctcgctgttcgtatggataggaaaagattgatagtt
ttgtttaaagagcaaacctacatctatgatgttaacagcttggaaaaaaagcagattatt
gatacagtgcctaatgtacaaggactttgtgcattttctgcttgcgtggataatccctat
ttagctcttcccgctagtacaacaaaagggtctttactagtctacaatgtagtggatctg
cagtcacactgtgagatagacgcccatcgctcgcccctaattgccatggctttttcttca
aatgggacatatatagctacagcatctgaacacggaactataatcagagttcatctaatc
tctgatgcaactaagtcatacagtttccgtaggggtacatattcgtcgacgatcttttct
ctgtcatttgggccttcggctgatcttccagatattcttcttgctacaagctcttcaggt
tctgttcacattttctccctgggctttgatcttaatgaaagaaagtcaaacagccttctt
gggtcaataattcctggttctgttagcgatgcactggatcctgctcatcatcttgtattc
catcatgctttctcagctggagtcagaagtaatgctgtagttcaaaagatagagaaagcc
agtggttcatcaaatcccgatcctgttgtgttgagagccaccatatcaatgattagcttc
agtggatactatcaagaatatagtttgagaattaacaacaaaaacgaagctacatggacc
ttggagcgcaggtccaaagctatcgcagaataa
DBGET
integrated database retrieval system
