Salvia splendens (scarlet sage): 121748575
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Entry
121748575 CDS
T07627
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121748575
Spliceosome [BR:
sspl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121748575
Other components
Complex C specific factors
121748575
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
121748575
NCBI-ProteinID:
XP_041998959
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Position
9:12618784..12622295
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AA seq
846 aa
AA seq
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MDEYQERERFGMDNDYDDGQWIGGEFYGKRRQKRVQTKDDVLYGVFASGDSDSDEGFGSK
NKRRKDSSKKTDYSKPVSFVSTGTVMPSQEIEHNSKEDNDVMEEEDVKPAGLGLGFGSAD
SKRANEDKEEDDDFLPTAFGKIIREGAKLREEKEKEKARAAKKSSQASKRDLDPNGVGEF
EKHTKGIGMKLLEKMGYKGGGLGKNEQGITAPIEAKLRPKNMGMGFNDYKEAVRPAIQEV
DEKSVPRPSHSLDGRNNENLWSKKVSKKKAYITAAELLAQKEEKGFEVVQKVFDMRGPQV
RVLTNLENLNAEEMARENDVPMPELQHNIKLIVDIIEHDIQRLDGNLRNERETVVALQKE
KEKLQKEADDQKQRLGNMEEIIAVLDQLGEKSSSGLLTLESLAKSFVDLQTRFPDEYTLC
NLSCIACSHALPLFIRIFQGWDPLQNPTHGTEVVSLWKTLLQGKDSLNFSSTASPYVQLL
MEVVFPAVRISGTNSWQARDAEPMLRYLDSWEELLPPPILQAILDSVVMPKISAAVDSWD
PHRETIPIHEWIHPWLPLLGHKFENCYHTIRNRLASVLHAWHPSDGSAFAILSPWKTVFD
PASWEHLMVRYIIPKLLTVMHEFQINPANQSLEQFNCVVKWVSAIPTHHMLQLMDVFFNK
WQEVLYHWLCSKPNFDEVTQWYLNWKELLPQELQANEHIRYRLNLGLAMMNQAVEGMEVA
TPGLKENISYLRVREQRQFETQKKAAAQAQHRTMPSSDNEIPAEGISGGNEMSLKEVIEI
HAQQNGLLFKPKPGRLQDGHQIYAFGNISIIIDSLNQKVFTQTEGRWSLVSLEQLLELQS
RSKMRR
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaggagagggaaaggttcggcatggataatgattatgatgatggccag
tggattggtggcgagttttatggcaagcgcagacagaaacgtgtgcagaccaaagacgat
gttctttacggtgtgtttgcttctggtgatagtgactctgacgaggggtttgggtcgaag
aacaagcgcaggaaggattcgtcgaagaagactgactactctaagccagtcagttttgtt
tcgactggcacagttatgcccagtcaggagattgaacataattccaaggaggataatgat
gtaatggaggaggaggatgtcaaacctgctggtttaggcctcggatttggttctgctgat
tcgaaaagggcaaatgaagacaaggaagaagatgatgacttcttgcctactgcctttggg
aagattatcagggaaggtgcgaagttgcgggaagagaaggaaaaggagaaggctagggca
gccaaaaaatcatctcaagctagcaaaagggacttggacccaaatggtgttggtgaattt
gagaagcataccaagggtattggaatgaagttgcttgagaagatgggctacaagggtggc
ggtcttggtaaaaatgagcagggaatcacagctcctattgaggccaagcttcggcctaag
aatatgggaatgggttttaatgactacaaagaagccgttcgtccagcaatacaggaagta
gatgaaaaatctgttccacgtccaagccattctctagacggtcgcaataatgaaaatctt
tggtcgaagaaagtttcaaagaagaaggcttatataacagctgcagaactgttggcccag
aaggaagagaaaggttttgaagttgttcagaaggtttttgacatgagagggccacaagtt
cgggttttgacaaatttggaaaacttgaatgcagaagaaatggccagggaaaatgatgtc
ccgatgccagaacttcagcataatatcaaattgatagttgatataattgagcatgacatt
cagagacttgatggtaatctgagaaacgaaagggagactgtggttgctttacagaaggaa
aaggagaagctgcaaaaggaggctgatgaccagaaacaacggcttggaaacatggaggag
ataatagctgtattggaccaattgggcgagaagagctcttcaggattgttaactttagaa
tcacttgctaaatcatttgtagatttacagacaagatttccggatgagtacacattatgc
aacttatcttgcattgcgtgttcgcatgctctgcctctatttattagaatatttcaggga
tgggacccactacagaatccaactcatggaactgaggttgtatcattgtggaagacactg
ttgcaaggaaaagattctttgaatttctcaagtacagcttctccatacgtgcagctgctt
atggaagtcgtatttcctgctgtaagaatatctgggaccaactcttggcaggcaagggac
gcagagcccatgcttaggtatttggattcttgggaagagcttttgcctcctcctatccta
caggccatactcgacagcgttgttatgccaaaaatatcagctgctgtagactcttgggat
ccgcatagagaaactattcccatccatgagtggatccacccttggttaccattgttgggt
cacaagtttgagaattgctatcacacgattcgcaatagattggccagtgttcttcatgct
tggcacccaagtgatggatcagcttttgccatattgtctccttggaagactgtctttgat
cctgccagttgggagcacttaatggttcggtacatcattccaaaactattgactgtcatg
catgaattccagataaatccagccaatcagagtctcgaacaatttaattgtgtcgtgaaa
tgggtgtctgctattcctactcatcacatgctgcagttaatggatgttttctttaataag
tggcaagaagtgctttatcattggttgtgttcgaaaccaaattttgatgaagtgacccag
tggtatctcaactggaaagagctccttcctcaagaacttcaggcaaatgagcatatccgg
tataggcttaatcttggtttggccatgatgaaccaggcggttgaaggcatggaggtggct
acacctggattgaaagagaatattagctatctcagggtgcgcgagcaaaggcagtttgaa
actcagaaaaaagctgctgcacaagctcaacataggaccatgccaagttcggataatgaa
attccagcagagggcattagtggtggaaacgagatgagcttgaaagaagttatcgaaatc
catgctcagcaaaatggtttgctgttcaagcccaaacctggtagattgcaagatgggcat
caaatatatgcatttggtaatataagcataattatagactccctcaaccaaaaggtgttt
acccagaccgagggcagatggtccctcgtatcacttgagcagctgctggaattgcaaagt
cgttcgaagatgaggcgataa
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