Salvia splendens (scarlet sage): 121748694
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Entry
121748694 CDS
T07627
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121748694
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
121748694
Transfer RNA biogenesis [BR:
sspl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
121748694
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
121748694
NCBI-ProteinID:
XP_041999122
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Position
1:36471906..36479554
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AA seq
792 aa
AA seq
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MAVRLVSGFRCCTVTPSPAALRCCLRHHNHVHLHSSTCFSISRRLRCRLISFGYEAVRRY
SAQSLVDMVMEELDSIRKRGIARASNKLGLGTGDQLIENKPGKKTLQKGLLLEFKKDSER
VLLAVVQKPDGKKNWMVSDQNGAMASIKPQQITFIVPGIKDFDHMEIPDFIQKAQDNLDP
ALLEFAWIELVEKNKSITVEELAEMMFGSAEPLESYSAHLLLSKDDIYFTTMETKGSYSV
YGPRPAVQVEELMHRKHAKEAAERELEEFVNLLRSARDAQFHAKPPKSMWSSEEKNQTKI
EILQAYAIDDCRNEDEKKTAGMQILKAIGLPKTASAAMNLLIDIGYFPVHVNLDILKLNI
HTDYAEEILMAAERLLLESPDQDEVERIDLTHLKVYAIDVDEADELDDALSATRLQDGRI
KIWIHVADPTRLVQPGSIIDKEAMKRSTSVFLPSATYPMFPEKLAMEGMSLKQGKHCKAV
TVSVVLHGDGGIAEYSVENSIIKPTYMLTYESATELLHLNLEEEAELRLLSEAATLRFQW
RRRQGAIDASTLEARIKVTNPDDPEPLIKLYVENQADPAMRLVSEMMILCGEVMATFGSV
NKIALPYRGQPQSNIDISDFAHLPEGPVRSSAIVKTMRAAEFDFRKPTRHGVLGLPGYVQ
FTSPIRRYMDLLAHYQVKAFLRGDSPPFSAGQLEGMASLVNMNIRLVRRLSSSSLRYWMI
EYLRRQPKEKKFSALVLRFIKDRVAAILLMEVGIQGSAWVSLGVQVGDEVKVLVEEAHPR
DDVLIFKEAQAI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcctcgtgagcggattccgctgctgcacagtgacaccgtcgcccgccgcc
ctcagatgttgcctgcgccaccataatcatgttcacttgcactcctccacttgcttctca
atttcccggcgacttcgttgtcgcctcatatcatttggctatgaggcggttcggaggtac
tcggcgcagagtcttgtagatatggtgatggaggagctcgactcaatccggaagcgcggt
atagctcgcgcctcaaataaattgggattgggaactggtgatcagcttattgaaaataag
cctggaaagaagactctgcagaaaggattgttgctagagttcaagaaggactcggagagg
gtcttactagcagttgtgcagaaaccagatggcaaaaagaactggatggtttctgatcag
aatggtgcgatggcatctatcaagccgcagcaaattactttcattgtcccgggtatcaag
gactttgatcacatggagataccagactttattcagaaagcacaagataatctggaccca
gcactgcttgaatttgcgtggattgaacttgttgaaaagaataaatcaataaccgtggaa
gagcttgcagagatgatgtttggtagtgcagaacctctggagagctattctgctcatttg
ttgctttcgaaggatgatatatacttcacaacaatggaaactaaaggttcatattccgtt
tatgggccaagacctgccgttcaggtggaagaacttatgcacaggaagcacgccaaagag
gctgcagagagggaacttgaagagtttgtcaatttactgagatctgccagggatgcacag
tttcatgcgaagcccccgaagtccatgtggagctctgaagagaaaaatcaaacaaaaatt
gagattcttcaagcatatgcaattgatgattgtaggaatgaagatgaaaagaagactgct
gggatgcagattttgaaggccataggacttcctaaaacagcatcagcagcaatgaatctc
ctcatcgatattggttatttcccagtacacgtaaatcttgatatactgaagctcaacatt
catactgattatgcagaagagattctaatggccgcggaaaggcttttgctcgagtcacct
gaccaagatgaggttgagaggatagatctcactcacttaaaggtttatgccattgatgtt
gatgaagctgatgagcttgatgatgcactgagtgcaactaggcttcaggacggccgtata
aagatctggatccatgtagcagaccctacaagattggtccagcctggaagcatcatagac
aaggaggcaatgaagaggagcacttctgtttttttaccatctgctacatacccaatgttc
cctgagaagttagccatggaaggcatgagtttgaagcaagggaagcactgcaaagctgtt
acagtttcagttgtgctgcatggtgatggtggcattgcagaatactcggttgaaaactca
atcatcaaaccaacatatatgttaacttatgagagtgcaacagaactccttcatttgaac
ctggaagaggaggctgaactcagacttctttcagaggctgctacactgcgatttcaatgg
cgtcgaaggcagggtgcaatagacgcatctacattagaagccagaatcaaggtgaccaac
ccagatgatccagagcccttgatcaagctgtatgtggagaatcaggcagatcctgctatg
cgtcttgtatctgagatgatgatactttgtggcgaagttatggccacttttggttctgtg
aacaaaattgccttaccttaccggggacaacctcagtcaaatattgatatatctgatttt
gctcatcttcctgaaggccctgttaggagttctgctatagttaaaaccatgcgtgctgca
gaatttgatttcaggaagcctacccgccacggagttttaggacttcctggatatgttcaa
ttcacatctcccatacgtagatatatggatctacttgctcactatcaggtaaaagcattt
ctcaggggagattctcctcctttttcagcaggacagctggaggggatggcttctttggta
aatatgaatataaggttagtgaggcggcttagctctagcagtctccgctattggatgata
gaatacctgagacgacaaccaaaagaaaagaagttttctgccttggtccttcgattcatc
aaagatagagttgctgcaatactcttgatggaggttggaatacaaggttctgcttgggta
tctctaggtgtgcaagtaggtgatgaagtaaaagttctggtagaagaagcacatccacgt
gatgatgttcttatatttaaggaggctcaagcaatttag
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