Salvia splendens (scarlet sage): 121748769
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Entry
121748769 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121748769
09124 Replication and repair
03420 Nucleotide excision repair
121748769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121748769
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121748769
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121748769
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121748769
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
CUE
UBA_3
Dsc3_N
MmeI_C
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
121748769
NCBI-ProteinID:
XP_041999211
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Position
9:13411810..13415237
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AA seq
373 aa
AA seq
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MKLTVKTLKGSYFQISVHATDTIMAVKKCIEDVQGKDNYPCGQQLLIYNGKVLKDESTLA
DNKVSEDGFLVVMLSKSKSLSSSASTSSQPASTAAPSSKQAAPVSNPAPAPAPVAEAQPS
VPDPKSTGPDSVAPLENSQSGSYEEAASSLVASDNLDHTIQQIIDMGGGSWDKETVRRAL
RAAYNNPERAVDYLYSGIPESTEVDVPLAQPPVDLMDVTGPPALGGPNSSPLNLFPQEAI
AGAGSLGFLRNNQQFQALRSLVQANPQILQPMLQELRKQNPSLLRLIQENHQEFLQLINE
PVDGSEGDIFDQADQDQDMPHAVSVTPAEQETIERMEAMGFDRALVIEAFLACDRNEELA
VNYLLENAGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaaaactctcaaaggcagctactttcaaattagcgtccatgctacc
gataccataatggctgttaagaaatgtatcgaagatgtgcaaggaaaagataattatcca
tgcggtcagcagttactgatttataatgggaaagtgttgaaagatgaaagtaccttagct
gataacaaggtctctgaagatggctttcttgttgttatgctaagcaagagcaaaagcttg
agctcaagtgcgtcaacatcttctcagcctgcttccactgctgcaccatctagtaagcaa
gctgcgccagttagtaatcctgctcctgctcctgctcctgtagctgaagctcaaccatct
gtaccggatcctaagagcaccggaccagattctgtggccccgttagaaaatagccaatct
ggatcatacgaggaagctgcttccagtttagttgcttctgataatcttgaccacactatt
caacaaatcattgatatgggtggtggtagttgggacaaagagacagtgagacgtgctctt
cgagccgcatacaataatccagagcgagctgtcgattacttatattcaggaatccctgag
agcacagaagtcgatgttccattggctcagcctccagtagatttgatggatgtaactggt
ccaccagctttaggaggaccaaactcgtccccattgaatttgtttcctcaggaggctatt
gctggtgctggatcccttggtttcctcaggaacaaccagcagtttcaagcactgcgttca
ctagttcaagctaatccacaaattctacagcccatgcttcaggagctgagaaagcaaaac
ccttcactcttgagactcatacaagaaaaccatcaggagttccttcaattaattaatgaa
cctgttgatggttctgaaggggatatattcgatcaagctgaccaggaccaggacatgcca
cacgctgtcagtgtcacacctgctgaacaggagacaatcgaaagaatggaagccatggga
ttcgatagagctcttgtgattgaggcatttttagcttgtgaccgcaacgaagaactagca
gtgaactacttgttggaaaacgctggagattttgaagattga
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