Salvia splendens (scarlet sage): 121748887
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Entry
121748887 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121748887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121748887
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121748887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Spc7
Motif
Other DBs
NCBI-GeneID:
121748887
NCBI-ProteinID:
XP_041999377
LinkDB
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Position
9:complement(9197580..9203197)
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AA seq
812 aa
AA seq
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MRFSFDLTEGRQSPTPSPSSSTPKSELEWFPLQNHPLFSSATATPAAALDTSGRKPPNLM
AWDGASRLYIWDLKKKCLHRLSIRLGEPDPSSILAASPSKVLQAETPVSFEVSKISINKN
GSAMLLAGTEGLCVMYLYGRSSLAQNTIICRTASLGSEIYFQRNDLIRILQICWHPYSDT
HLGILSSDSVFRIFDLSTDIGQPEQEYYLQPVEYGSSRNAAAICPVDFSFGGEHLWDKFS
VFILFSDGSTYIICPVVPFASLYKWESILELYNDAHTFGLKSADSKAVSNSNMAISWLEA
TFPELVHQDGGGGQLHFVRAQPFVHMDASVSLQGPLHNMCDGVTEDSDVQKGTCEGRAVS
FHYNLVGKDTILVIARSDGQLQLDALADEIQPVWTMGSAPRLCFTSSDKIAGVAMICESF
LSSPTVLKLDQTPYSTAWLGQPPPLLRLAIVDLALPIESSSLIGMISDPLLPERTFCIHA
GGIDSIVLHFLPFTNHSTGKEEPIRTPSVNSVLSTCPGDSSSPSPLHGFLALSDSYGSSW
IVGLTSSNDCIVLQMETWNVLLTDAFDKIQENLTTNEKTSTKQTGSNTIISKELLSGPKA
VLLPPSAPNLRSVTADSIEGRSMLHQYFKLFHENYVEYAHKVHFELQRHAPQLKNIIDGE
HSRLHKMQQKLLEIETNQEKLEDRVDRAVKIHSSLEERLKSLRSLPGLQKNPLSKAEREF
KMELDKFTGLELDALHSSIEALSARTKRYTHSLQADSPTQRTQRLVRRGNRVPDDGVSEL
KSLLEKLSLINSENSKKVKLVESALKTREITD
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttctcgttcgacttaacggagggccgtcaatctccgactccttcgccgtcgagt
tcgactcccaagtcagagctcgaatggttcccgctgcagaaccacccgctcttctcctcc
gccactgctacgcccgccgccgctctcgatacttccggaagaaagccccccaatctcatg
gcctgggatggagcttcgcggctatacatttgggacttgaagaagaaatgcctccaccgg
ctttcaattcgcttgggcgagcccgacccctcttccatcctcgctgcttcgccctctaag
gtgttgcaagcggaaacaccagtcagttttgaggtgagtaagatttctatcaacaaaaat
ggctcagctatgctcctggccgggacggagggcctatgtgttatgtacctttatggacgc
tcttcactagcacaaaataccatcatctgtcggaccgcttctcttggttcagagatttac
ttccagagaaacgacctcatacgcattctacagatttgctggcacccatacagtgataca
cacttgggaatcctgtcgtctgattctgttttcagaatttttgatttgtctacagatatt
gggcagccagagcaggaatattatttacaaccggtagagtatgggagtagccgtaatgct
gcagcaatttgtccagttgatttctcttttggtggtgaacatttatgggataaattcagt
gtttttatcttgtttagtgatggatccacttacataatttgccctgttgttccttttgca
agcttgtataaatgggaatctattttggagctttataatgacgctcatacatttgggcta
aaatcagccgattcaaaagctgttagtaattcgaatatggcaatctcatggctggaggca
acatttcctgagttagttcatcaagatggaggtggtggacagttgcattttgttagagct
cagccttttgtccatatggatgcatcagtttcattacaggggcctctgcataacatgtgt
gatggtgtgactgaagattctgatgttcagaaaggcacatgtgaagggcgtgcggtcagt
tttcattacaatttagttggcaaagacacaattcttgtgattgctcgtagtgatgggcaa
ttgcaactggatgctttggctgatgaaattcagccagtttggacgatgggtagcgcacct
cgtctttgtttcacctcatcagataagatagctggtgttgctatgatatgtgagtctttc
ttgagtagtcctactgttttgaagctagatcagaccccgtattctactgcttggttgggc
cagccgcctcctttgctgaggttagccattgtggatttagctttgcctatcgaaagtagt
tctctgattggcatgattagtgatcctctcttacctgaaagaacattttgtattcatgct
ggagggatagattcaattgtcttgcattttctccccttcactaaccactcaactgggaag
gaagagccaattagaactccatctgtgaattctgtacttagtacatgccctggcgactca
tcctccccatcacctcttcatggtttcctggctttatcagattcttatgggagctcgtgg
attgtgggacttacttcttctaatgactgtatagtgctacagatggaaacttggaatgta
ttgcttactgatgcttttgataagatccaagaaaatttaaccacaaacgagaaaacaagt
acaaaacaaacaggttctaacacaataataagcaaagagcttctcagtgggccgaaggca
gttctattgcccccttctgcaccaaatttgcgctctgtaacagctgattctattgaagga
cgatcgatgcttcatcaatatttcaagctgtttcatgaaaattatgtggagtatgcacac
aaggtgcactttgagctccagcgtcatgcgcctcagttgaaaaatataattgacggagag
cattctcggttgcacaagatgcaacagaagctcttggaaattgaaacaaaccaggaaaaa
ttagaggatcgtgtagatcgtgcagttaagattcacagttccttagaggagcggctaaaa
agcttgaggagcctgcctggactgcagaaaaacccactttctaaagcggaaagagaattc
aagatggaactcgataaatttactggattggagttggatgcattgcactcttccattgaa
gctctgagtgcaagaacgaaaagatacactcattcgttgcaggctgattccccaactcaa
cgaacacaaaggctagtgagaaggggaaatagggttccagatgatggtgtgtctgaactc
aaatctttacttgaaaaactctcgctcataaacagcgagaacagcaaaaaggtgaaactc
gttgaatccgcattgaaaaccagggaaatcacagattga
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