Salvia splendens (scarlet sage): 121748922
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Entry
121748922 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121748922
09124 Replication and repair
03420 Nucleotide excision repair
121748922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121748922
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121748922
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121748922
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121748922
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GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
TECR_N
CUE
UBA_RAD5A
UBA_3
Crinkler
Dsc3_N
Ubiquitin_4
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
121748922
NCBI-ProteinID:
XP_041999435
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All DBs
Position
9:5151913..5156534
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AA seq
381 aa
AA seq
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MKIFVKTLKGSHFPVEVKPEDTVADVKKSIEEVQGSGVYPAAQQMLIHQGKVLKDETTLE
ENKVAENSFVVIMLSKTKASSTGGTSSAPPSNNPQPASNTSQPTLPVTAAPSPAPTVAPV
QSAPESSPVPVPSPAPAPSADVYGLAASNLVAGTNLESTVQEIFDMGGGSWDRDTVVRAL
RAAYNNPERAVEYLYSGIPEQAEIPPVAQPPAGVQPVNPSSQATQPAVPPSGPNANPLDL
FPQGLPNMGSNAAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQ
EHQADFLRLINEPVEGEGNILGQLAEATPQAVTVTREEREAIERLESMGFDRALVLEVFF
ACNKNEELAANYLLDHMHEFE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtgaagactctgaaaggctcgcacttccccgtcgaagtgaaacccgag
gacactgtggcagatgtgaaaaagagtattgaagaagtccaggggtctggtgtctaccct
gctgcccaacagatgcttatccatcaagggaaagtgctcaaggatgagacaactctagag
gagaacaaagttgcagaaaatagttttgttgtgattatgttgtccaagaccaaggcttca
tcaactggaggaacatcatctgctccaccatcaaacaatccacaacctgcgagtaataca
tctcagccaacgttacctgtaacagcagctccttctcctgcaccaactgttgcccccgtg
caatcagctcctgaatcttctcctgttccagttccttctcctgcccctgctccctcagca
gatgtgtatggtctagcagcatcaaatcttgttgctggaactaatctggagtccactgtt
caagaaatttttgacatgggtggaggaagctgggatagagatacggttgttcgtgcccta
agggctgcatataataatcctgaaagagctgttgaatacctctattctggtattccagag
caagcggaaattcctcccgtggcacaacctcctgcaggtgtgcagcctgtaaacccttca
tcccaggctacgcaaccagctgtacctcccagtgggcccaatgctaatccgttggatcta
tttcctcagggtcttccaaatatgggttctaatgcagcaggtgctggcacattagatttt
cttcgtaatagtcagcagtttcaagccttacgagccatggtgcaagcaaatcctcaaatt
ttgcagcctatgctccaagaacttggaaagcagaatccacagcttgtaaggttgatccaa
gaacaccaggctgacttcctacgcctaataaatgaacctgttgaaggcgagggaaatata
cttgggcaactcgctgaagcaacgccacaggctgtgactgttactcgtgaagagcgggaa
gcaattgaacgtcttgaatcaatgggttttgatcgagccttggtgctggaagtcttcttt
gcatgcaacaagaatgaagagctggcagcgaactacctgctggatcatatgcatgaattt
gaatga
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