Salvia splendens (scarlet sage): 121748968
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Entry
121748968 CDS
T07627
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121748968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121748968
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
121748968
Prokaryotic type
Archaeal type
TFB
121748968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
121748968
NCBI-ProteinID:
XP_041999498
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All DBs
Position
9:17970855..17973821
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AA seq
313 aa
AA seq
DB search
MMSDTYCPDCKKNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRV
GGPVNPLLGDAALSTVISRATNGANVDMSLTRLQNRGGDPDRALVLAFKTISSMADRLSL
VTTIKDRASEIYKRLEDQKCTRGRNMEALVAGCIYIACRQESKPRTVKEICSIVAGATKK
EIGRAKEFIVKQLKVEMGTSMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGNFD
IRRSPISIAAAIIFMITQLSESKKPLRDISLATTVAEGTIKNAYKDLYPHATKIVPEWYS
KERDLKNLSSPKS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacacatattgtccggactgcaagaagaacacggaggtggtgtgcgatcac
gctgcgggagacaccgtctgctcggagtgtggcctcgttctggaagcccgctccatcgac
gagacgtctgagtggcggactttcgccgatgattccggcgaccacgatccgaatcgtgtc
ggaggacccgttaacccgcttctaggggatgcggcgctctccacggtcatctcgcgggcc
actaatggggcgaatgtggatatgtctctcacccgcctgcagaatcggggcggggatccg
gaccgggctctggtcttggcgtttaagacgatttctagcatggccgataggttaagtctt
gtaacaaccattaaggatcgtgcaagtgaaatatataaaaggttggaagatcagaagtgt
acaaggggtagaaacatggaggccctagtggctggctgcatttatattgcttgtaggcag
gaaagcaagccacgcacagtaaaagaaatatgctcaattgttgctggagcgacaaagaaa
gaaattggccgggcaaaagaatttattgtgaagcagttgaaggttgagatgggcacatca
atggagatgggcacgattcatgcaggggattatctgaggcgtttttgttctaatcttggg
atgagtaatgaggaggtaaaagcagtacaggaaactgtgcagaaggcagggaactttgat
attaggaggagtccaatatctattgctgcagccatcatttttatgataactcagctatct
gaatccaagaaacccctaagagatatctcacttgcgactaccgtggcagaaggtacgatc
aagaatgcgtacaaggatctatatccccatgccaccaagatcgtacctgaatggtattca
aaggaaagggacctgaagaatctttcgagccctaaatcgtaa
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integrated database retrieval system
