Salvia splendens (scarlet sage): 121749506
Help
Entry
121749506 CDS
T07627
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121749506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121749506
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121749506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
DUF6913
Motif
Other DBs
NCBI-GeneID:
121749506
NCBI-ProteinID:
XP_042000006
LinkDB
All DBs
Position
1:38160594..38164814
Genome browser
AA seq
814 aa
AA seq
DB search
MEKETSSRKRRESDSHRDRESSKDHRHHRSKHDDGRNRSDDHHRRRSDSRAEREGSRDRD
ARRERERSHSLERKRRKDRGESEERDRDVRRDRERSHSVERKKRKERSDSEDRSEKRTRV
YDDNGRDRRRFEDVMAEEGEKDAEGLGFGGDTVNKGAKHEPRNGVATGPIVAPASTYPET
IEARIDSPATKVSSISKTNENKGVNINRSHEVPGKSSTDGTTTDASASGGLSRDILAKAK
LALQKQKELAERMKKISSLNRDVGSTGEGNQRVVDKGGAKTSSSVILPNPASAPASVPTE
GVPSMPNPTALVQAGVSQISGLTAQNVEAVKRAHELAAKMGFWQDPEFATVFNAFPGQMP
PDITIQQKPSKVPVLRLDALGREIDEEGKVVDIPKAQSLSTLKVNINKQKKDAFRILKPE
LDVDPETNPHFDPRVGINKNKLLRTKRPTMLFVEEGKWSKDAESIKLRSQFGEAKAKELK
AKQAQLAKAKAEPDINPNLIEVGERVITKEKTKESIPDVEWWDVPFLRSGSYGDIIDGGI
DAENIKMDKINIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKDRQEMI
RLGVLEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHIDRNIARKLTPAE
RREKKERKLFDDPSTVDTIVSVYKINDLSHPQARFKVDVNAQENRLSGCAIISEGISVVV
VEGGSKAIKRYGKLMLKRIDWTATVEKEDEEENDDEKAFNKCQLVWQGSVAKPNFNRFFV
QECRSEAAARKFFSDHGVAHYWDLAINFTTDDPM
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaacctcgagccgtaaacggcgagaatccgattcacatcgagatagagaa
tcatcaaaagaccaccgccatcaccgttccaagcacgacgacggccgcaacagatccgat
gaccaccatcgccgcaggtccgattcccgagctgagagagagggaagcagggatcgggat
gcgcgcagagagcgcgagaggtcccattcgcttgagcggaagaggaggaaggataggggt
gagagcgaggagagggatcgagatgtccgccgcgaccgcgagcgatctcattcggtggag
aggaagaaaaggaaggagcggagcgatagtgaggataggagtgagaagagaactagggtt
tatgacgacaatggaagggataggcgtaggtttgaggatgttatggccgaggagggtgag
aaagatgccgagggtttgggatttggaggtgacactgtgaataaaggggctaagcacgag
cctcgcaatggggttgcaactggacccattgttgctccagctagcacttaccctgagact
attgaggctcgtattgattctcctgctactaaggtatcttcaatttcaaagacaaatgaa
aataagggagttaatattaacagatctcatgaggttcctgggaaatccagtacagatggg
acaactacagatgccagcgcaagtgggggcttgtcccgtgatattttagctaaagctaag
ctagctcttcaaaagcaaaaagagcttgcagagaggatgaagaagatttcttcactgaat
agagatgtgggctcaacaggagagggtaatcaaagagtggttgataaagggggagcaaaa
acttcttcctcagtcatactgccaaatccggctagcgcccctgccagtgttcctactgaa
ggtgtgcctagcatgccaaaccctactgctttggtacaggcaggtgtgtctcagattagt
ggactaacagcacagaacgttgaagctgtaaaacgtgcacatgaattggctgcaaaaatg
ggattttggcaagaccctgagttcgctaccgtcttcaatgcatttccagggcagatgcca
ccagatattaccatccaacaaaaaccttcaaaagttcctgttcttcgtttggatgcattg
ggccgtgaaattgatgaggaagggaaagtcgttgatattccgaaagcccaaagcctcagt
actctcaaggtgaatatcaacaagcaaaagaaagatgccttccgaattctcaaacctgaa
ctggatgtggatcctgaaaccaatccacattttgatcctagggtggggattaacaaaaat
aagcttttaaggactaagagaccgactatgctgtttgtcgaggaaggcaagtggtcaaaa
gatgcagaaagtattaaactgaggtcccaatttggagaagcaaaagcgaaggagcttaaa
gcaaagcaagcacagctggcaaaggcaaaagcagagccagacataaatccgaatctgata
gaggtaggagagagggtgattaccaaagaaaaaaccaaggaatcaattcctgatgtcgag
tggtgggatgtgccttttctacgttctggtagctatggtgatataattgacggtggcata
gacgcagaaaatatcaagatggacaaaatcaacatatatgttgaacatcctcgaccaatc
gaacccccggccgaaccagctccccctccccctcaaccattaaagctaaccaagaaggag
cagaagaaacttcgcacacagcgtcggttggctcgggaaaaagataggcaagagatgatt
agactaggtgtattggagccaccaaaacctaaagtgaaaatgagcaacctcatgaaagtt
cttggatcagaagcaacacaggatcccacaaagcttgaaatggaaataagaagtgctgca
gctgagcgtgagcaggctcacattgacaggaacatcgctcgtaagctcacgcctgcagag
cgtcgtgaaaagaaagagagaaagttatttgatgatcccagcacggttgatacaattgtt
tcggtttacaagatcaatgacctttctcatccccaggcccgttttaaggttgatgttaat
gcccaggaaaacaggctgagtggatgtgcgatcatttcagaaggtataagtgttgttgtc
gttgaggggggttccaaagcaatcaagagatatgggaagctcatgcttaagaggattgat
tggactgctactgttgaaaaagaagacgaggaagagaatgatgatgagaaagcattcaac
aaatgtcagcttgtttggcagggaagcgtagctaaaccaaatttcaaccgatttttcgtc
caagaatgcagaagtgaagcagctgcacgcaaattcttttctgatcacggagttgctcat
tattgggatcttgcaatcaacttcaccaccgatgatcctatgtaa
DBGET
integrated database retrieval system
