Salvia splendens (scarlet sage): 121749751
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Entry
121749751 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121749751 isoform X1
KO
K24155
rabconnectin-3a
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121749751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121749751
Membrane trafficking [BR:
sspl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121749751
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
121749751
RAVE complex
121749751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_C
EIF3I
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
121749751
NCBI-ProteinID:
XP_042000311
LinkDB
All DBs
Position
1:38495271..38509343
Genome browser
AA seq
2479 aa
AA seq
DB search
MAEATSAAASPLPPPLDVGSRFPLHLIKSEIIPPAPSRSPCGSAAAADFLLDFAGHSWIA
YGAASLVVISHLPDPLSEAETRIGPIYRQVIELSREADAHVSAVCWSPARPSIGELAAAL
GDRILLLSYGGDENSTSSFCWRQTTMLVLSMKVEAIQWTVSGDGIISGGTDVVMWRKKEK
SWEIAWSFKPKIPQALVSTTWTACGLSATAPWSEVQVGGSSAFPNDAGDCVLVFQFDGHS
KYPQHELRHPMPIGMIQWRPSTGKPPSKHAKHAQRPILLTCCLDGSVRLWGEIDDGRIRR
NVKDNSDHKAKLSFCVLAVIEVNQTLNGILGSDVFVRWAMDVEGVTVNDKEVCYYSCSDN
LQHDTAARCEWLIGFGRQRVITMWAIHCLDDFAPVRFPRVTLWKKHDLVSSVVEPSQLLM
YKVCIMRTQVSGSPTLCSLVQLSPCNSFSWWQLYSQTSASMKLESASDNHANSSLAACAK
GVLEVEGHIDKILQIAVHPFSFEVELAASLDRNGMLLFWSFSTFFNSHIGQPISTPSWKL
CGKPAIIDHSPKYTCLSWAPTVLGDSNVLLMGHSNGIDCFLVKVLKNNEQKITYHNLFSL
PFVIEGQEQVLTRMNSIPLPCNCDGNSVSSKFLLIALWMDTFRALSWEITIHCDYSQGSC
LNEHWKTFESDFYGKQYLVSVYPASSVIPVTNNDDKVTSCAVVCPSDLISSSQKLSSADE
IGSTCYAYHMITGCFNGSLKLWRSMPLDSLRSDKKWALVGVLTSQQGPILNVSMSPCGQK
IASASINSQSKNYSTTLCIWECMHVKGVGSFMLEDKLCFDGVIVAFNWLKMGIGQLLLAV
CSQNDLRIYASRRRGGQGGLKSEKPLEENAWICIAAKSNLPPISDFLWGPKGTAVVVHDK
YFSIFSHFLSLSDYTGSHDIVHYSTFTDSEKAPSNIGGKYESQPPAKMNNNVESFQWTYS
YATEKCFWSMSEIAEKIGGSLPLFHPEALFNNLCSGNWKRAFIALRHLASGTLSEQGHGA
KMPSSLVSPVPLSDYLDGILPLHSSGNVFHWSTSQLHTGLFNSLPEGGYGAHNSTMTSLL
SKSEFDGFIESLESLYSYNCINTDEKIQAIALVDLLREVGNANSTSAYGSLDEPGRRFWV
AVRFQQLYFAQRYSRLPLVEEFVVSPGLIGWAFHSDCHDNLFNSLLPTEPSWEEMRSMGV
GFWYTNVSQLRVKMEKLARQQYMKKKDPKACLLLYIVLNRLQVLAGLFKISKDEKDKPLA
GFLFRNFQDDKHKAAAIKNAYVLLGKHQLELAVAFFLLGGDASSAVTVCAKNLGDEQLAL
VICRLIEGCGGPLECNLIVKFLLPSALSKGDLWMASFLEWLLGNYPQSFFRMLGAEVGSE
VNISVLSSSHTCFLDPSIGQYCLVLANKTKLKNAVGELNAANLCRWASLMNITSFRRCGL
PLEALESILSSVSIFGGPAHGSLTHNPTGDLPAELTQPSVYENSSNWMLEETSFHIISYC
KLYLALQYMSTLMKEHPSSLENDRPSSFKEAINLEVDRQDFEKLLKEFEDKLTEAITYFQ
QKFSLVPLHLIKMIVLSLCHNGLDFIGHYILQDYAPKFLSQEKSNLPDDLFWSPSNLFKA
TEEMLSLYVKYIVASCKNCSRSTYLAVDSLSSEGRLCWLTVWGLSNQGMTETFRCLRAML
QLFLRSQAVDFQKLLLFVLSLFEFHILFATAWLQKNFKAIIVSIGPILSNLLDESDFNGL
KMENLKKLISEIMELLVHGLVYVESGQKQEPSGAVSDNKAWHIISSSFWVCMSKFLEHQL
STLPEVPEDFFSSGPLPVLELDGNNLQQQARLTSSTLVQFLKLTCSDISFYCSKKFATYL
LQEANTLNKNNLSSFENGLYQSGRENINPMIEYPKPLDHGNELPDLDKLRNIFAGSEILR
GTFEQEYHNWLPYIKQKSSSGWSYAYASITAEFGLEENWDKEDGFGSPRAIGSPLAYTTP
DHPFKTSDDNNTCDSKRVMPFQNPKEICRRNGELLEALCINSIDQSQAALASNKKGIVFF
NWEDGIPDRYKAECIWGEADWPHNGWAGYESTPVPTNGSSAVGFGSKKATHLGLGGATIG
AGSLVRPGGELTGGGAFGIPGYAGMGASSLDWDLQESFDEFLDPPATIDSVRTSAFASHP
CRPFFLVGSGNTRIYLWEFGKGTATATYGVLQAANVPTPYALATVSAARFDHCGHRFVTA
ALDGTVCTWQLEVGGRSNIHPTESSVCFNNHTADVTYVTASGSIVAAAGYSSNGVNVVVW
DTLAPPATSQASIMCHEGGARSLAVFDNDIGSGSVSPLILTGGKGGDVGLHDFRYIATGR
TKKHKHLDPGEHNMNASSSVDMRSKTGDQNRNGMLWYIPKAHSGSITKISTIPNTSFFLT
GSKDGDVKLWDAKRAKLVFHWPKLHERHTFLQPSSRGFSGVVRAAVTDIQVVSNGFLTCG
GDGIVKYIGFQGNPLETTN
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctacttcggccgccgcttctcccctgccgccgccgctcgatgtcggctcc
cgtttcccgctccacttaatcaaatccgagataattcctcccgctccctcacgatccccc
tgtggatccgcggcggccgccgatttcctgctcgacttcgccgggcactcatggatcgcc
tacggcgctgcctctctcgtagtcatatctcacttgccagaccctctatcggaagcagaa
acgagaatcgggccgatatatcgtcaagtgatcgagctatctcgagaagccgacgctcac
gtatccgccgtgtgctggtcccctgcgaggccgtccattggcgagcttgcggcggcgttg
ggtgatcgcattttgttgctatcgtatggcggagatgaaaattcaaccagttctttttgt
tggaggcagactacaatgcttgtcttatccatgaaggttgaggccatccagtggacagtt
tcaggagatggaataatttcaggaggcactgatgttgtaatgtggagaaagaaggagaag
tcgtgggaaatagcttggtcattcaaaccaaaaattcctcaagctcttgtctctaccacc
tggactgcctgtggtctttcagctacggcaccatggagcgaagtacaagttggaggttcg
tctgctttccccaatgatgcaggagattgtgtattagtttttcaatttgatggacattct
aaatatccacaacatgagctgcgtcatccaatgcctattgggatgatacagtggaggcct
tcaacaggaaaaccaccaagtaagcatgctaagcatgcccagagaccaatcttgttaact
tgctgccttgatggatctgttaggttatggggtgaaattgatgatgggaggattagaaga
aatgtaaaggataatagtgaccacaaagcaaagttatctttttgtgtccttgctgtaatc
gaggtaaaccaaactctgaatggtattctgggctctgatgtctttgtaagatgggcaatg
gacgttgaaggtgtgactgttaatgataaagaagtatgctactattcatgctcagacaat
cttcagcatgatacagctgctagatgcgagtggttgattggttttggtcgtcaaagggtg
ataacgatgtgggctattcactgtcttgatgattttgctccagtgagattcccaagggtt
actttatggaagaagcatgatctagtcagctctgtagtggaaccaagtcaattgcttatg
tataaagtgtgcattatgaggactcaagtttcaggctctcccactctttgctcattggtt
caattgtcaccttgtaattcattctcttggtggcaattatattctcaaacctcagctagc
atgaaattggaatctgctagtgacaaccatgccaacagctctttggcagcttgtgccaaa
ggagtgctagaagttgaaggtcacatcgataaaattttacagattgcagttcatccgttt
tcttttgaagttgaactcgctgcttctttagatagaaatggaatgcttcttttttggtca
ttttcaacctttttcaatagtcatattggccagccaatatctacaccttcttggaaactc
tgtggaaaacctgctattatcgatcactctcctaaatacacgtgcttgagttgggcgccc
acagtgctaggtgacagtaatgttcttctcatgggacattcaaatggcattgactgtttc
ttggttaaggttttgaaaaacaatgaacagaagatcacttatcacaatttattttctttg
cccttcgttattgaaggtcaagaacaagtgctaactagaatgaactccatccctttgcct
tgcaactgtgatgggaactccgtttctagtaaatttctgcttatagcattatggatggat
acttttagggctttatcatgggaaataaccatccattgcgattattcacaagggagctgt
ttgaatgagcactggaaaacatttgaaagtgatttttatggtaagcagtacttggtttca
gtctaccctgcctcatcagtcattcctgtgactaacaacgatgacaaggttactagttgt
gctgtggtctgccccagtgacttgatttcatcttcacaaaagctgagttctgccgatgag
attggcagcacttgctatgcctatcatatgataactggttgcttcaatggcagcttaaaa
ctgtggaggagcatgccactcgattctttgcgctcagataagaagtgggctcttgttggt
gtccttacttctcagcaaggtcctatactaaatgtctctatgagtccctgtggtcaaaag
attgcttctgcctccataaatagtcaatcaaaaaattattctactacactttgcatatgg
gaatgcatgcatgtcaaaggtgtgggcagcttcatgctggaagataaactttgttttgat
ggggtgattgttgcttttaattggttaaaaatgggaattggtcagctattacttgccgtt
tgttcacaaaatgatttgcggatatatgcttcacgacgccgtgggggtcaaggtggatta
aaatctgagaagcctttggaagaaaatgcttggatatgcattgcagctaagagtaatcta
cctcctatttctgacttcctttggggccctaagggcacagctgtagtagttcacgacaag
tattttagtattttcagtcactttttgtcgttatctgattacactggctcccatgacatt
gtgcactattcaactttcactgattctgaaaaagcaccatcaaacattggaggcaaatat
gagtcgcagccccctgcaaagatgaacaataatgttgagagcttccagtggacgtacagt
tatgccaccgaaaaatgtttctggagcatgtcagaaatagcagaaaagataggaggatct
ttgcctctatttcacccagaggcactctttaataacttgtgctcaggtaactggaaacgt
gcgtttatagctctacgccatcttgcttctggcactttgtctgaacaaggtcatggtgct
aaaatgcctagcagtttagtttcaccagttcccttgtcagattatcttgatgggattctt
ccacttcattcaagtggtaacgtatttcattggagtacatcccaacttcacacgggttta
tttaactctctccccgagggaggttatggtgctcataattccaccatgacttcattgctg
tccaaatctgaatttgatggcttcattgaatctcttgagagtttgtattcctataattgc
ataaatacagacgaaaagatacaggccattgcacttgttgatcttctacgagaagttggt
aatgctaactcaacttctgcttatggaagcctagatgaacctggtcggagattctgggtt
gcagtgaggttccagcaactatattttgctcaaagatatagtaggttgcctctggtggaa
gagtttgttgtctctccaggactcattgggtgggcttttcattcagattgccatgacaat
ttgtttaattcgctactaccaacagagccatcttgggaagaaatgcgcagtatgggtgtt
gggttctggtatacaaatgtatcgcaattgagggttaagatggaaaagctggctagacaa
cagtatatgaagaagaaagatcctaaggcatgtttactcctttatattgtgttaaacagg
cttcaagttttggctggcctcttcaaaataagcaaagatgaaaaggataaaccattagcg
ggatttctctttagaaactttcaggatgataaacataaggctgcagctattaaaaatgct
tatgtactattgggaaaacatcaactagagctagcagtagctttctttttgctcggagga
gatgcttcttctgctgtgacagtctgtgccaagaaccttggagatgaacagcttgctctt
gtaatatgtcgtctcatagagggatgtggtggacctttagaatgcaatctcattgtaaag
tttctcctcccatctgcactatcaaaaggcgacctctggatggcaagttttctagagtgg
ctattgggaaattatccccaatcgtttttcagaatgcttggtgctgaagtgggttcggag
gtcaatatttctgtcctttcatcctctcatacctgttttctggatccaagtattggtcaa
tattgcctggtgttggcaaacaaaactaaattgaaaaatgctgttggggagcttaatgct
gctaatctctgtcggtgggcatctctgatgaatattacttccttccgaagatgtgggcta
cctcttgaagcattggagagcattttgtcatctgtgagcatatttggtggccctgcccat
gggagcttgacgcataacccaactggtgatcttcctgctgaattgacacaaccatctgtg
tatgagaactcctcaaactggatgttggaagagacatctttccatattatatcgtattgt
aagttatatttagcattgcagtacatgtcaaccttgatgaaagaacatccaagctcttta
gaaaatgataggccatcttctttcaaagaggctataaacctggaggttgaccgtcaggac
tttgagaaattactgaaggaatttgaagacaagttgacagaagctattacatatttccag
cagaagttctccttggttcctctccatctaattaaaatgattgtattgtctttgtgccat
aatggtctagactttattggacactacatattacaagattatgctccaaagttcctgtcg
caagaaaagagtaatctccctgatgatttgttttggtctccatccaatctgtttaaagct
actgaagaaatgttatcactgtatgtgaaatatattgttgcctcttgcaaaaactgctcg
agatcaacatatttggccgtggatagtctttctagtgaaggcaggttatgctggcttact
gtgtggggtttgtcaaatcagggcatgaccgagacatttaggtgtctaagagctatgttg
cagctgttcctaagatcccaagctgtagattttcagaagttacttttatttgttctcagt
ttgtttgaattccatatactttttgctacagcttggcttcaaaagaatttcaaagctatt
attgtatctattggacctattctgtctaatttactggatgaaagtgacttcaatgggttg
aagatggagaatctgaagaaacttattagtgagattatggagttgctagttcatggttta
gtgtatgttgagtcaggacaaaagcaggaaccaagtggagcagtttctgataacaaggcc
tggcatatcatcagttcttctttttgggtgtgcatgtctaaattcttggaacatcaactc
agtacattgcctgaagtacctgaagattttttttcttctgggcctcttcctgtattagaa
cttgatggaaataatctacagcaacaagccagattgacctctagcactttggttcagttt
ctcaagctcacgtgctcagatatttcgttttattgttcaaagaaatttgcaacgtaccta
cttcaagaagcaaatacattgaacaaaaataacctttcatcctttgaaaatggtctgtat
caatcaggaagggagaatattaatccgatgattgaatatccaaaaccattagaccacggc
aatgagttgccagatcttgataagttaaggaatatttttgctggttccgaaatccttcgt
ggaacctttgagcaagagtatcacaattggctaccatacattaagcaaaagtcatctagt
ggatggagttatgcatatgcaagcatcacagcagagttcggattagaggaaaattgggat
aaagaagatggatttggtagtcctcgtgcaattggatcacctttagcatatacaacccca
gatcatccttttaaaacttctgatgataataatacatgtgactcaaagagggtgatgcct
ttccaaaatcctaaagaaatatgtagaagaaatggggaacttttggaggctctgtgcata
aactccatcgatcaatcccaggctgcacttgctagcaataagaaggggatagtatttttc
aactgggaggatgggattcctgataggtataaagctgaatgtatttggggagaagcagac
tggccccacaatgggtgggcaggatacgagtccaccccagttcctacaaatgggtcttct
gctgtgggctttggaagtaagaaagccacacaccttgggttgggaggggccacaattggt
gcaggctccttggtgcgaccaggaggagaattaactggtgggggagcctttggcattcca
ggatatgctggtatgggagcatccagccttgattgggatctacaagaaagttttgatgag
ttccttgatccacctgcaacaattgatagtgtaaggacaagcgcatttgcatcacatcca
tgcaggcctttcttcttggttggttccggcaatactcgcatatacctttgggagtttggg
aagggcacagctactgcaacctatggagtacttcaggctgcaaatgtacctacaccttat
gctcttgccactgtgtctgctgcgcgttttgaccactgtggacacagatttgtgactgcc
gcattagatggaactgtatgcacgtggcagcttgaagtgggaggaagaagtaacattcat
cctacagaatcttctgtctgctttaacaatcatactgcggatgttacttatgttacggca
agtggatcaattgtggctgcagcaggatacagctccaatggggtgaatgttgttgtatgg
gacacacttgctcctccagctacttctcaagcttcaataatgtgtcatgaaggaggtgct
cgatcccttgccgtttttgataatgacatagggagtggttctgtctctcctcttatttta
actggtggaaaaggtggtgatgttgggcttcacgacttccgttacatagctactggaagg
actaagaaacacaagcacttggatcctggggaacataatatgaatgcttcatcttctgtt
gatatgcgtagcaaaactggtgaccagaataggaatggtatgctttggtacataccaaag
gcccactcagggagtatcaccaaaatttctacaattccaaataccagtttcttcttgact
gggagtaaggatggggatgtgaagctttgggatgcgaagagggccaagttagtatttcac
tggccaaaattgcatgaaaggcacaccttcttgcaacctagctctcgtggatttagtgga
gttgttcgggctgcagtcacagacattcaggttgtttctaatggcttccttacatgtgga
ggagatggtattgtaaaatacattggatttcaaggcaatccactggagacgacaaattaa
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integrated database retrieval system
