Salvia splendens (scarlet sage): 121749817
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Entry
121749817 CDS
T07627
Name
(RefSeq) actin-interacting protein 1-2-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sspl04990
]
121749817
Domain-containing proteins not elsewhere classified [BR:
sspl04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121749817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
NBCH_WD40
RMC1_N
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_IFT122_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
121749817
NCBI-ProteinID:
XP_042000401
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Position
9:18849666..18860424
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AA seq
610 aa
AA seq
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MAELKETFACVPSTERGRGILISGDPKSNSILYTNGRSVMIRYLDRPLEVKVYGEHMYPA
TVARYSPNGEWIASGDVSGTVRLWGTHNDFVLKKEYRVLSGRIDDLQWSADGERIVACGD
GKGTSFLRAFVWDSGSNVGEFDGHSKRVLSCAFKPTRPFRIVSCGEDFLVNYYEGPPFKF
KMSHREHSNFVNCIRFSPDGTRFITVSSDKKGLLYDAKTGEMNGELTSEDGHKGSIYAVS
WSPDSKRVITVSADKTAKVWEVSADSNGNLVKTLTCPGSGGVNDMLVGCLWQNDHIVTVS
LGGSIFLYSSSDLDKAPLELSGHMKNINSLVLLKGAPQIILTTSFDGQIIKWLQGKGFSG
KLERNVSTQIKCFEALEGEIVASGFDNKVWRIPMLGDQCGDADSVDISCQPSDLSLAILS
PDLVMVSHDTGVTLLRGTKVVSTIDLGFTATACSIAPNGNEAVVGAKDGKLHVYSVLGDT
LKEEAVLEKHRGPITVIHYSPDISMFASADSNREVAVWDRATHEIKLKNMLYHTARVNCL
AWSPNNDFIATGSLDTCVIIYKIDKPADQRITIKGAHLGGVYGLAFSDDNTVVSSGEDAC
VRIWKVTPPQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcaaggagactttcgcttgcgtgccgtcgacggagcgcggccgcggcatt
ttgatatcaggcgatccgaaatccaattcaatcctctacactaacggccgatccgtcatg
attcgctacctcgaccgccctctcgaggtcaaggtctacggcgagcatatgtaccccgcc
accgtggcgcgctactcgcccaacggcgagtggatcgcctcgggcgacgtgtccggcacc
gtgcggctctgggggacgcacaacgatttcgtcctcaagaaggagtaccgtgtcctctcg
gggcggatcgatgatctgcagtggtctgccgatggcgagcgcattgtcgcatgcggcgac
ggcaaggggacatccttccttcgcgcatttgtgtgggactcaggaagcaatgttggagaa
tttgatgggcattcaaaaagagttttgagttgtgcctttaaaccaacaagaccttttcga
attgtatcatgtggcgaggactttttggttaactattatgaaggacctccatttaagttc
aagatgtcacacagggaacactcaaattttgtgaattgcattcgcttttctcctgacggg
accagatttattactgtaagctctgacaaaaagggtctactttatgatgcaaagactgga
gaaatgaacggggagctgacttctgaggatggtcacaagggcagtatatatgcagttagt
tggagtcctgacagcaaaagggtcataacagtgtctgctgacaaaactgcaaaggtgtgg
gaggtatctgctgatagtaatggaaatctggtaaaaacattgacatgtcctggatctggt
ggagtaaatgacatgctagttggttgtctatggcagaatgatcacatagtcactgtttct
cttggtggcagtatttttctgtactcttccagtgatcttgacaaagctcctctagaatta
tctggacacatgaaaaatattaattcactagtactgctgaaaggtgccccccaaattata
ttaacgacaagtttcgatggccaaataattaagtggcttcaaggtaaagggttctctgga
aagctagaaaggaatgttagcactcaaattaaatgttttgaagctcttgaaggagaaata
gtggcatcaggatttgacaacaaggtttggagaattcctatgcttggagaccaatgtggg
gatgcagatagtgttgatatttcctgtcagcccagtgacttgagtcttgccattctttct
cctgatcttgtaatggtttcacatgatactggtgttacactcctccgtggtacaaaagtt
gtatccactattgatctggggttcactgcgacagcatgtagtattgcacctaatggaaat
gaagctgttgtgggtgctaaggatggaaaattgcatgtctactctgtcctgggtgataca
ctgaaagaagaggctgtacttgaaaaacatcgaggtcctatcactgtcattcactactca
cctgatatttccatgtttgcatctgctgattctaatagagaagttgccgtttgggatcgt
gctactcatgagataaagcttaaaaatatgttataccatacggctcgagtaaactgcttg
gcctggtctcctaataacgactttattgcaactggatcactcgacacatgtgtcattata
tataaaatagataagccagcagatcagcggataactatcaaaggagctcacttgggtgga
gtttatggattggcttttagtgatgacaacactgtagttagttctggtgaggatgcttgt
gtccgcatatggaaggtgacaccgccacagtga
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