Salvia splendens (scarlet sage): 121749830
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Entry
121749830 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121749830
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121749830
09124 Replication and repair
03420 Nucleotide excision repair
121749830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121749830
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121749830
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121749830
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121749830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
Tup_N
DUF908
Motif
Other DBs
NCBI-GeneID:
121749830
NCBI-ProteinID:
XP_042000418
LinkDB
All DBs
Position
9:9785739..9787379
Genome browser
AA seq
107 aa
AA seq
DB search
MPPIVTSDSSSPKASPRFRTRGTRRSSTRRRSLSSARTTQSATFSACNCTEMRTFCLPDT
RIQTTSQSSPMQAYNQAINDLDKELDHLKNAFEVELARHNASQQREF
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgatcgttacgagcgattcgtcgtccccgaaggcgtctcctaggtttcgtacg
agagggacacggagatcatcaacgcggcgacgttcactgtcgagcgcgaggaccacacaa
tcggcaacattctccgcatgcaattgcacagagatgagaacgttttgtttgccggataca
aggatccaaaccacgagccaatcttcgccaatgcaggcatataatcaggctatcaatgat
ctggacaaggaactcgatcatttgaaaaacgcatttgaggttgagttggcaaggcacaat
gcaagtcaacaacgggagttctaa
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