Salvia splendens (scarlet sage): 121750143
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Entry
121750143 CDS
T07627
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121750143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121750143
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121750143
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121750143
NCBI-ProteinID:
XP_042000550
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All DBs
Position
10:13540923..13551947
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AA seq
933 aa
AA seq
DB search
MDADTDRNYLSPFMKRFSATSSNDLGSKRRKRIKADEGSNYSYGTFPASWRYVVEQRRNQ
TYTQALNESDPYTTKILLNQLDSGKFGSVTKEIEELIKRRRQVLDYFYAQNPELSLTTCP
DVQDSVVSKPMELVAPDVIDLDDDNDGEMERLIPESQLSHHAAPVVIIDSDDDNDATCGP
LEVDLKPPSINLLIKDKPTANLLIKDKPTANLLMKDYVDWNSAKSKNSREAGTQMHITGE
AETGTTNDKGVYVGTDDLEEDDELSNTNSDGLDDIWQEMTKALVDSKDAPGEALHDQYDV
GDEEDCEHSFIFKDDIGDVCRICGVIKRGIETIIEYNFSKTSRTTRTYKYEGRTSREYEH
IDIPLDRFKLSDGDSSVTEIHPHPRHKREMKPHQVEGFNFLLSNLVADKPGGCILAHAPG
SGKTFMIISFLQSFMAKYPNARPLVVLPRGLLSIWKKEFLRWQVEVIPLHDFYSVKADSR
IQQLEVLKEWKKERSILFLGYKQFSSIICDSDSGNVARACQTILLEDPDILILDEGHTPR
NQDTDVLTSLERIATPRKVVLSGTLYQNQVKEVFNILNLVRPRFLKMDTSKVIRRRILSR
AEISGRRNLMKHGTDNEFYELIEHTLIKDENRLRKVTVIQDLREMTRSVLHYYKGDNLDE
LPGLVEFSVYLQLSPRQKADVKELTKTVARKFSVNAQGSAIYLHPTLKTLARSSGVKDRV
DEGKIDTILGSLNVKEGVKLNFYLNLLQLCESSGEKLLVFSQYLLPLKFLERITAKVKGY
SIGKEMFMITGDSDAETRDSSMEKFNSSSEARVFFGSIKACGEGISLVGASRIIILDVHL
NPSVTRQAIGRAFRPGQLKKVYTYRLVASDSPEQEDHNSCFKKESIAKLWFEWEEGSGPL
NFEMEEVDDVSNCGDDFLETPRLREDVVKVYRR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgataccgacagaaattatctgagtccatttatgaagagattctcggctact
tcttcaaacgatttgggctcaaaacgacgcaaaaggataaaagcagatgaaggaagtaat
tatagttatggtacctttcctgcttcatggcgatatgtagttgagcagagaagaaaccaa
acatatacacaagctctgaatgaatcggatccttacaccacaaagattttgctgaaccaa
ttggattctggtaaatttggaagtgtgacgaaggagatagaagagcttatcaagcggaga
cggcaggtgttagattacttttatgcacagaatcctgaactatcattgaccacatgtcct
gatgtgcaagactcagtggtgtcaaagccgatggagctagttgctcctgatgtcattgac
cttgatgatgataatgatggggaaatggaaaggttgattccagaatcacagctttcccat
catgctgccccagtggttatcattgattcagatgatgataatgatgctacatgtggtcca
ctagaagtggatttgaagccaccttctattaatcttctcattaaggataaacctactgca
aatcttctcattaaggataaacccaccgcaaatctcctcatgaaagattatgtggactgg
aattctgccaaaagcaaaaattctcgagaagcaggtactcaaatgcatattacaggcgaa
gctgaaactggaaccacaaatgataaaggagtgtatgtgggtaccgatgacttagaggag
gatgatgaattgtctaatactaattcagatggtctggatgatatttggcaagagatgacg
aaggctttagtggattcaaaggatgctcctggagaagctctacatgatcaatatgatgtt
ggggatgaagaagactgtgagcattcttttatttttaaagatgacattggtgatgtatgc
cggatttgtggggttattaagagaggaattgaaaccattattgaatataacttctcaaag
acctcaaggactacaagaacttacaaatatgaaggacgaaccagtagggagtatgagcat
attgatatcccccttgatcgattcaaattatcggatggtgattcttctgttactgaaatt
cacccacatccacgccacaaaagggagatgaaaccccatcaagttgagggatttaacttt
cttctgagcaacctagtggcagataaacctggaggttgtatactggcacatgctcctggt
tctggtaagacattcatgatcatcagtttccttcagagtttcatggccaaatatccaaat
gcaagacctctggttgtgttgccgaggggactcttgtcaatatggaaaaaagaattcctc
cgatggcaagtcgaggtgatacctttacatgacttctactcagttaaagctgacagccgc
atacagcagcttgaagttttgaaagaatggaagaaagaaaggagcatactgtttctagga
tataaacaattctcctctattatctgcgattctgacagcgggaacgttgctcgggcatgc
caaactattttgctggaggacccagatattctcatcctagatgaaggccacactccccgg
aaccaagacactgatgtcttgacgtcactggagaggattgcaactcctcgaaaggtggtt
ctttctgggacactctatcagaaccaagtgaaagaagtttttaacatcttaaatcttgtg
cggccaaggtttctgaagatggatacttctaaagtcataaggaggcgtatcttgagcagg
gcagagatatctggcagaaggaatttgatgaagcatggcacagacaatgagttctatgaa
cttatagagcatacgctgatcaaagatgaaaaccgactccggaaggtgactgtgatacaa
gacttgcgggaaatgactagaagtgtcttgcattattacaagggtgataacttagatgaa
cttcctgggctcgtggaattttcagtttatcttcagctcagccccagacagaaggctgat
gttaaagagctgacgaaaacagtggctaggaagttctcagttaatgcacaaggaagtgct
atttatctgcacccaacattgaagacgcttgccaggagttccggtgtaaaagatagagtt
gatgaggggaaaattgacactatcttggggagcctaaatgtgaaagaaggtgtaaagctc
aacttctaccttaatcttctccagctctgtgaatcaagtggagagaagctgctagttttt
agtcaatatctcctacccctgaaattcttggagagaattacggctaaggtcaagggttac
agcattggcaaggagatgttcatgatcacgggtgattctgatgcagagacgcgtgattct
tcaatggagaaattcaacagttcatctgaagctcgagtcttctttggctccatcaaagcc
tgtggggaggggatatctctggtgggggcatctcgcatcattatacttgacgtccatcta
aatccatcagtcactcgccaagcaattgggcgagcatttagacctggccagctcaagaaa
gtctacacttacaggctggttgcatctgactcacctgaacaggaggatcacaattcatgc
ttcaagaaggagtccattgcaaagctgtggtttgaatgggaggagggcagtggtccgctg
aattttgagatggaagaagttgacgatgtcagcaattgtggagacgacttcttggagact
ccgcgactgagggaagacgtcgtcaaagtgtatagaaggtag
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