KEGG   Salvia splendens (scarlet sage): 121750148
Entry
121750148         CDS       T07627                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121750148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121750148
   03041 Spliceosome [BR:sspl03041]
    121750148
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121750148
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121750148
Spliceosome [BR:sspl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121750148
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 PHM7_cyt RRM_3 RL
Other DBs
NCBI-GeneID: 121750148
NCBI-ProteinID: XP_042000556
LinkDB
Position
10:15763589..15766525
AA seq 331 aa
MEDLKKRKLDELGNSEVSPNSKDSTANSTIEELRALLDPLAKPQLVDILARAGSQYPSIA
EEIKSVASADPALRKLFVRGLAWNTTSETLCAAFIEHGEIEEGAVIYDKVTGKSRGYGFV
TFKDMESAQTALKAPSKMIDGRMAVCNLASEGLSSNSITPDQAQRKLYVGGLSPETTSEM
LLAFFSRHGEIEEGSVAYEKDTNKSRGFGFVTYKTVEAAKRAIDDPQKLLGGRNITAKLA
DNYKGKVTQSQIPSSAVPVPVHMNGGAPMGYGYPQPMAAYPPASYTNPQTAAAPPYAVLP
HYSYPQYGVKKDTPPPQMAMGGYPSYYMPKQ
NT seq 996 nt   +upstreamnt  +downstreamnt
atggaggatttgaagaagaggaagctagatgaattggggaacagcgaggtgtcgcccaac
tccaaagattcgaccgcgaattcaactattgaggaattgcgcgcgcttcttgacccgctc
gctaagccgcagctcgttgatatacttgctagagctgggtcccaatatccttctattgct
gaagaaattaaaagtgttgcaagtgctgatcctgcccttcgaaagctttttgttcggggt
ttagcatggaatactacttcagaaactttgtgtgctgcctttatagagcatggtgaaatt
gaagagggtgctgtgatatacgacaaagtgacaggaaaatcgcgtggttatggttttgtt
actttcaaagatatggagtctgctcagacggctctaaaagcacctagtaaaatgatagat
ggtcgtatggctgtttgtaaccttgcgagtgaagggctaagcagcaacagcataacacct
gatcaagcccaaaggaaattgtacgttggtggtttgtcacctgagacgaccagtgaaatg
ctgctcgccttcttcagtaggcatggtgagattgaagagggttccgttgcttatgaaaag
gacacaaataaatcacgcggtttcggctttgttacctacaagactgtcgaggcagcaaag
agagctatagacgacccccaaaaattgctcggaggaagaaacatcactgccaagctagcc
gataactacaaagggaaggttacacaatcacagataccatcatccgcagttccagtgcct
gtacatatgaacggtggagcccctatggggtacggctatccccaaccgatggcagcatat
ccgcctgcttcctatactaacccacaaacagcagcagctcctccttatgctgtccttcca
cattactcttatcctcagtatggtgttaagaaagacacgcctcctccacaaatggccatg
gggggctacccttcttactacatgcccaagcaatga

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