Salvia splendens (scarlet sage): 121750240
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Entry
121750240 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121750240 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121750240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121750240
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121750240
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121750240
NCBI-ProteinID:
XP_042000669
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Position
10:14292275..14307877
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AA seq
1975 aa
AA seq
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MASTAPATTAAKSSDTAKIVDASLWWDSFSALLTELENASVSSETPPDLGRKLKDNHSWF
LDTVSQFKPPNQKSREALDSPRVKVGPHELNIQPKLKDAALKISSILCLDEVQSYIISKR
SLERHNATTHDLHPDIINLVILEYYIERQCLLKCTRQIFMHALYFETESEGVSTVLEVAK
RLTSGGLECKLLSIFEDLLSSKYPDQMDFDLYTLWAEETLIEDNLILDILFLVYCESFCA
CDAECWKRLCALYEGIVNGSYNFQKLAISPDAIRAIYHAKVQLMLILIQSLNLESLLQMI
HDNISFRQGSLSFSEMEVQQIDSMISSFNTFEYKELGPLILAWALFLCLVSSLPEKEENN
MLMEIDHIGYVRQAMEASSLRYFLDILESDTFKYSDGPLAGYRSVLRTFVSAFIASYEIN
IQFEDENLKLILDILCKIYNGEESLCDQFWDRDSFIDGPVRCLLFNIEGEFPFRTIELLR
LLSALSEGAWPSECVFNFLDKSTGLSTPFEIMNGPVVDAVSKIVETHSPLHVAGVEGLII
PGKSRGQVLRMLDDNCALVRWEHTESGVLVLLLRLAKELYMQNPEEVIFILDLLSRLASF
NTAICCTLTKSWNCSCDGDYVMGNEQSYLRIDIVEIVCVVLKNAPPSISGAIMMSMGVNI
LTKMLKCKPSHVASMAMKGNIFDVALRTNPFDVGSNNLSSGSWLLSGRLAKMLLIDCEQS
DCSMTLSVLDFTMNLLEKGLETDTVLALIVFSLQYVLINHEFWKYKVKPARWKVTQKVLE
VMRKCISSISWCPKLGEVVRDIMFSDSSIHSAIFRIVCTTAPTLEKHHVSRLFDILDIEG
LELAISSGLDVLLSMIFTFSKHPQGSSVFHEAILSMTTKPVPVITAAISFISYFRNDTIQ
IAGARLLSALFMADISQSYTHNNMNLGLDDKQVAHFRKSITSILFQQSPSSEDLIIAILR
FLTSAASNQPAFLAAVIASKEYSNTQVQNAPEHQPKKTENESLDSLEESLLYAILQYLKD
SEDLLHRKPNMLLYLLKFLKALWQGAPQFSKNLEQLKVADEFWKHLTRSLVLIAHRDNIS
EKLTEMDLQNMACECQILSNVLDILSYEIFVQKKLRHAASVANRISTSPPNGAEKTEHNF
KKNGSLKETISTWCKTSVLSDLIKVCVSSEYDESSHTRAKVAAGSFAVHVMVKLRSGDSG
SLSVSLIERISALSEKLFKLPAFSDLLTQYTERSYSGGQELENLILSDLFYHIQGELNGR
QIDNGPFKELLQFLIDSRFLDAYKYARDDDLPANVKSVYLYDTVRLKTDLGLEMWDLLAW
KESKDLVETMLLSLQDVNSRMLHSTSKHSALRGLVTLLYMRQNNDEDLTGLKISEQVVSS
GIDHICQSIHASMASLTPAGDASVDIVLDILTAQAELLLLLLRSVETKLSQPDRVLILKA
SSYGLKVLSGCRLTLAAETATRFLLILILSVKLTCKDSGLGYSTETESTEVSSEVSYSSL
GLLPVLCSIQHPDNCILSLAAIDFILKGFSTPATWFPIIQKHFPLPHIVQKLQDAAASKM
VPIILKFLLNLARVRQGAEMLLNAGILASLRMLLSDFPDGGPLSVIQSESILANIDKTEK
SQPIWGLSLAVLTSIIHSLGDNSASVVDYVMACILIEKAPSVFYYLTAPDLPTNGHENKR
ARALKSNTSLDELKATQNTLALICVLAEHSNSWKKNLQSMESQLREKSIHLLAFISRATQ
HPGESPRREAPLSCHPVLKEELELFKKPSFVNSKKGWFALSALGCKSNHSLSLLSSKSTA
LILRDQSNENINSSHQTHLSDLIAIEMYKTAFLLLKFLCTQTEAAARKAEEVGFVDIANF
PELPMPDILHGLQDQGIAIITELCEANKTKQVASEIEEVCTLLLQVTVMALYLEYSVIQI
CGIRPVLGHVETFSKELRLLIRATEGHVFLKEPLTILKQIVAVVYPELVHQDALF
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaccgcgcccgcaaccaccgcagctaagtcttctgacaccgcaaaaatagtc
gacgcctcactctggtgggattctttcagtgcacttctcaccgagcttgaaaacgcctcc
gtgtcatccgaaacccctccagatttgggtaggaagttgaaggacaatcactcttggttt
ttggacactgtgtcacaattcaagccgcccaatcagaaatcgagagaagcattggattca
ccacgcgtgaaagttggcccgcacgagttgaatatccagccgaaattgaaagacgctgca
ctgaagattagtagtatcttgtgtttagatgaggtgcaatcatatatcatttccaaaaga
tcactggagcgccataatgcaacaactcatgatttacatccagatattataaatttggtc
attcttgagtactacattgaacggcaatgcttgttgaagtgcacaagacagatctttatg
catgccttgtattttgaaactgagtcagaaggagtttctactgtactggaggtggcaaaa
cggttaacttctggtggactcgaatgtaaattactttctatctttgaggacctgctatca
tctaaatacccggatcagatggattttgatctctacactttatgggcagaggaaacactt
atagaggacaacttaatccttgacattcttttccttgtttattgcgagtcattttgtgct
tgtgacgctgaatgctggaaaagattatgtgctctatatgagggtattgtgaatggatct
tacaacttccagaagctggcgatatcaccagatgctattcgtgctatatatcatgccaaa
gtgcagctgatgctcattctcattcagtctttaaacctggaaagtctccttcagatgatc
catgataacatttctttcaggcagggatcacttagtttttccgagatggaagttcaacaa
attgattcaatgatttctagcttcaatacttttgagtacaaagaattaggccctctgatc
ttagcatgggctttgtttctttgtctcgtttcttctctgccagagaaagaggaaaacaat
atgttgatggagatagatcatatcggttatgttcgtcaagctatggaggcttcatctttg
agatattttcttgacattctagaaagtgatacatttaaatattcagatggtcctctagct
ggttaccgaagtgttttaagaacgtttgtttctgcatttattgcatcttatgaaatcaat
atccagtttgaggatgagaacctgaaattgatattggacatactctgcaaaatatacaac
ggggaggagtccctgtgtgatcagttttgggatagggacagctttattgacggccctgtc
aggtgtcttcttttcaacatagagggggaatttccatttagaactattgagcttcttcgc
ttgttatcagccctgagtgaaggtgcatggccgtctgaatgcgtattcaatttccttgac
aagtccactggactgtcgacaccatttgagattatgaatggcccagtagtggatgctgtt
tcaaagatcgttgaaacacattctcccttgcatgttgctggggttgaaggcttgataatt
cctggaaaatctaggggtcaagtattgagaatgctcgacgacaattgtgctctggtcagg
tgggagcatacagagtctggagttcttgttttgcttttgcggttggctaaagagttgtat
atgcaaaatccagaggaagtaatttttattcttgacttgctcagtcgattggcgagtttt
aacacggctatctgttgtactctcacgaaatcttggaattgctcctgtgatggagactat
gttatggggaatgagcagagttatttgcgcatagacattgtcgagattgtttgtgttgtg
ctgaaaaatgcccccccaagcataagtggtgccataatgatgtccatgggggtaaacata
ttgacgaaaatgttgaaatgcaagccgtctcatgtagcttcaatggccatgaagggaaat
atctttgatgttgccttgaggacgaacccctttgatgttggatccaacaatttatccagt
ggatcctggttgctctctggaagacttgccaaaatgcttttgattgattgtgaacagagt
gactgctcaatgactctgtcagtgcttgacttcacaatgaatctactggagaaaggatta
gaaactgataccgtccttgcactcatcgttttctcacttcagtatgttctcattaatcac
gagttttggaaatataaggtgaaacctgctcgttggaaggtgacacagaaggtgcttgaa
gtcatgaggaaatgtatttcgtctatctcatggtgtcccaagctgggggaagtagttcgt
gatattatgttttctgattcttctatacactctgcaatcttccgaattgtttgtacgacc
gcaccaactttagagaaacatcatgtatctcgtttatttgacatactggatattgaggga
ttagagcttgcaatatcctctgggctggatgtcttgctcagcatgatattcactttttca
aagcatccacagggtagttctgtttttcatgaagcaattctatcaatgacgacaaagcca
gtacctgtgatcactgctgccatatcatttatatcatacttccgtaatgatactatacaa
atagctggcgcaagattgctctctgctttgtttatggcagatatctcacagtcctatacc
cacaacaatatgaatcttggtttggatgataagcaggttgcccatttcaggaaatctatt
accagcattctttttcagcagtcaccttcgagtgaggatctcatcattgctattttgagg
ttcctaacttctgctgcaagcaatcagcctgcttttcttgctgctgtcattgcgtcgaag
gagtactcaaatactcaagtgcaaaatgcccctgaacatcagccaaagaaaactgagaat
gaatcattagattccttggaagaaagtcttttatatgcaattttgcagtacctaaaagat
tctgaagacttattacataggaaaccaaatatgttgttatatttgttgaaatttctaaag
gcactttggcaaggtgctcctcagttctcgaagaacttggaacaattaaaagttgcagat
gagttctggaaacatttgacccgttctctggtgctcattgctcaccgagacaacatatct
gagaagttaactgaaatggatctccaaaacatggcctgcgaatgtcaaatcctgtccaac
gtattggatatactaagctatgagatttttgtgcaaaagaagttgagacatgctgcatca
gttgccaacagaatatctacttcacctcctaatggagcagaaaaaactgagcataatttt
aaaaaaaatggaagcctaaaggagactatttcaacctggtgtaagacttcagttttgagt
gacttgatcaaggtctgtgtttcctcagaatatgatgaaagtagtcatacacgtgccaag
gttgctgctggttcatttgctgttcatgtgatggttaaattaagaagtggtgactcaggc
agcttgtctgtgtcactaattgaaaggatttcagcattgtcagaaaagttattcaagtta
ccagccttttcagatttgttgacccagtatactgagcgtagttacagtggaggacaggag
ttggagaatctgattctaagtgatctgttttaccacatccaaggagagcttaatggccgt
cagattgacaacggaccatttaaagagttattacagtttctgatcgattcaagatttctg
gatgcctataaatatgcaagggatgatgatcttcccgccaacgtcaagagtgtctacctg
tatgatactgttcgcctcaaaacagaccttggattagaaatgtgggatcttcttgcttgg
aaagagtccaaggaccttgtggaaactatgctcctttctttgcaagatgtaaattcaaga
atgttgcactctacttccaagcattcagctttgcgtgggcttgttactctattgtacatg
cgccagaacaatgatgaagatttgaccggactgaagatttctgagcaagtagtttcttca
ggcattgaccacatatgtcagtctatccatgcctcaatggcatctttgactcctgccggc
gatgctagtgtagatattgtgctagatattcttacagctcaagcagagctactgctactt
ctcctcagatcagttgaaacaaaactttctcagcctgatcgtgttcttattttaaaggcc
tcaagctatggcctcaaagtattgagcggctgcaggctaactcttgctgctgaaacagct
actaggtttttgcttattttgatcctttcagttaagctgacttgcaaggattcgggttta
ggctattcaactgaaactgaatcaactgaagtttcatctgaagtttcttattcaagtttg
gggctattacctgttctctgcagcattcagcacccagataattgtatcctatccttggct
gccattgactttatactgaaaggtttctcaacccctgctacttggttccccatcatacag
aagcatttcccgttgccacatattgttcagaagctccaagatgcagctgcgtccaaaatg
gttccaatcatattaaaatttcttttgaatcttgcacgcgtgagacagggtgctgagatg
cttctaaatgctggtatcctagcatcactaagaatgctgttgtctgactttccagatggt
ggacctctctctgtaatccaaagtgagagcatccttgccaatattgacaaaaccgaaaag
tctcaacccatctgggggctgagcttggctgtacttacatcaattatccattctttggga
gataactctgcaagtgttgtggattatgtgatggcatgcatattaattgagaaagcacct
tcagttttctattacctaactgcaccagatctcccaacaaacggtcatgaaaataaaaga
gcccgtgcattgaaatcaaacacttccttagatgagcttaaagccacacaaaatactttg
gctctaatttgtgtcttggcggagcactcaaattcgtggaagaaaaacctgcaaagcatg
gagtcccagttacgggaaaaaagcatccatttgttagccttcattagtcgagcaactcag
caccctggagaatcacctcggagggaagctcctttatcctgccatcctgtgctcaaagaa
gaacttgagttgttcaagaagccttcatttgtaaacagtaaaaagggttggtttgctcta
tctgctcttggatgcaagtcaaatcacagcttgtcactcttgtcctctaaatcaactgct
ctgatcttgagagatcagtcgaatgaaaatatcaattcctctcatcagacacatttgtca
gatttaattgcaatcgagatgtacaagactgcattcctgctcttgaagtttttatgcaca
cagactgaagcagctgccagaaaggcagaggaggttggttttgttgacattgcaaatttc
cctgagctgccaatgcccgatattttacatggcttgcaggatcaagggattgccatcatc
acagaactgtgcgaagccaacaagacaaaacaggtggcttcggaaatagaggaagtctgc
actttgctgctacaagtaacagtaatggcattatacttggagtattctgtcatacaaatt
tgtggcattaggcctgtattaggccatgtcgaaacattctccaaggaactacgccttctt
attagagcaacggagggccatgtgttcttgaaagagccactgacaattttgaaacaaatt
gtagcagttgtgtatcctgagttagtacaccaagacgccttgttttga
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