Salvia splendens (scarlet sage): 121750247
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Entry
121750247 CDS
T07627
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121750247
03036 Chromosome and associated proteins [BR:
sspl03036
]
121750247
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121750247
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
121750247
SLIK complex
121750247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
OAM_alpha
SWI2_SNF2
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
121750247
NCBI-ProteinID:
XP_042000680
LinkDB
All DBs
Position
10:complement(5355606..5370651)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAFSRNSSNEAVDQIALNERSHLHQLDIDSSRLKDNAMTNNEEMTDLTPDKNGGEDTRSN
LRIGHDQPPVRGSAVGGKWGSSFWKDYPPARTSHGPSESGEESKSGSEYKGSEVEEESDG
LEDRMESEYDDITHKDLTGKGHQTVPVDEMLSDEYYEQDGDDPPNESVNHYRTANHSLGY
GSKPTSRPAPSNISRKLKGSKANKYSDEDADYEEDDDDEDEDDPDDADFNPDYGARSGES
RIKDEDEGWDAEDSDEDDNIDDEEDLDVSDEDDPYFKKSRAKQPSKSGRNLKSTREFKSI
ASSTRRKKGRASFEDDDEESSADDSENISDEDFRSSRRGAQAHRKNGGRSAAVNDSSRRN
ELRTSGRSVRKISYVESDGSEDIDEIKKKNQKNEEEEDADAIEKVLWHQRRGTAEEALRN
NKSTDPVLLSYLFDSELDWNDMEFLIKWKGQSHLHCQWKSFSELQNLSGFKKVLNYTKKV
MEDVKYRRMVSREEIEVNDVSKEMDLDIIKQNSQVERVIAERVVKDGSGEVVSEYLVKWQ
GLSYAEATWEKDIDISFAQDAIDEYKSREAASMVQGKTVDFQRKKIKGSLRKLDEQPEWL
KGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNSQQIQGPFLVV
VPLSTLSNWAKEFRKWLPEMNVIIYVGTRASREVCQQYEFYNDKRAGRSTNFDTLLTTYE
VLLKDKAVLSKIRWSYLMVDEAHRLKNSEASLYMALSEFSTKNKLLITGTPLQNSVEELW
ALLHFLDRDKFRSKDDFVQKYKNLSSFNETELTNLHMELRPHILRRVIKDVEKSLPPKIE
RILRVEMSPLQKQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKCCNHPFLFKSADHG
YGGDTNSLGSTKLERVILSSGKLVILDKLLNRLHETNHRVLIFSQMVRMLDILAEYLSLK
GFQYQRLDGSTKAELRHQAMEHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWN
PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLE
KKETKKGTTFDKNELSAILRFGAEELFKEEKNDEESKKRLLGMDIDEILERAEKVENKET
EGEEGHELLSAFKVANFGSTEDDGTFWSRMIKPEAVAQAEDALAPRAARNIKSYAEAIPS
EKTNKRKKKGVETQERMSKRRRADSAYSPPVLEGATAQVRGWSYGNLPKRDATRFFRAVK
KFGNDSQISSIAAEVGGTVEAASTEAQIELYDALIDGCREAIKGEIMDPKGPLLDFFGVP
VKADEILERVEELQSLAKRINRYEDPLSQFRALAYLKPSTWSKGCGWNQKDDARLLLGVY
YHGFGNWEKIRLDASLGLTKKIAPVELQHHETFLPRAPQLKERAALLLEMEVAAVSGKNS
NVKVGRKNAKKQKDALAISVGKGRQGKPTSPRGNIQMNRRRAPKSQKMEPLVKEEGEMSD
NEEVYEQFKEVKWREWCEDVMVDEEKTLKRLQKLQSISADLPKDKVLSKIRNYLQLIGRR
VDQIVAEYEQELYRQERMTTRLWNYVSTFSNLSGERLQQIYTKLKQEQGVGPSATGHRDL
DVEKFEAWKRKKRAEADPSHIQHPYQRPPPNNGTWLPDPSSSGILGPPPSESSRQLRNGR
PYRMQ
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttccagaaattcttcaaatgaagcagtggaccagattgcgttgaatgagaga
agtcatttgcaccagctggacattgatagcagtaggcttaaggacaatgctatgaccaat
aatgaagaaatgacagatcttacacctgataaaaatgggggtgaagatactagaagtaat
ctaaggataggacatgaccagcctcctgttaggggatcggctgtgggggggaagtggggt
tcatctttttggaaggactacccaccggcaaggacatcccatggaccatcagagtcaggg
gaggagtcaaagagtgggtcagagtataaaggctctgaagttgaggaggagtctgatgga
ttagaggatagaatggagtcagaatatgatgacattacacataaagatttgacggggaaa
gggcatcagactgttccggttgatgagatgttgtctgatgagtactatgagcaagatggt
gatgatccaccaaacgagtctgtgaaccattacaggacagcgaaccactcacttgggtat
ggttcaaagccgacatctcggcctgctcccagcaatatttcgaggaaattgaaggggtcg
aaagccaacaaatacagtgatgaagatgcagattatgaagaagatgacgacgacgaagat
gaagacgaccctgatgatgctgacttcaatcctgattatggggcaagaagcggggagagt
cggatcaaggatgaggatgaaggttgggatgctgaagattctgatgaggatgataatatt
gatgatgaggaggatttggatgtctcagatgaagatgatccctactttaagaaaagtagg
gcaaaacaaccaagtaaaagtggtcgtaatttgaagtctacccgagaatttaagtcaatc
gcatcatccactcggagaaagaaaggtagagcttcttttgaggatgatgacgaagaatct
tctgctgatgactcagaaaatatcagtgatgaagattttagaagttcaaggagaggtgca
caagcacatagaaagaatggtggtcgatctgctgctgttaatgattctagtaggagaaat
gaactgcgaacatcaggtcgttcagttcgtaaaatatcatatgtcgagagtgatggaagt
gaagatatcgatgaaataaagaaaaagaatcaaaagaacgaggaagaagaagatgccgat
gcgattgagaaggtattatggcatcaacgaaggggcacagctgaagaagcattgaggaat
aataaatcaacagacccagttcttttgagctatttgtttgattccgaactggattggaat
gatatggaatttctgataaagtggaaaggccaatcacatttacactgtcaatggaaatca
ttctctgagttgcagaatctcagtggttttaagaaggttttgaattataccaaaaaagta
atggaagatgtcaagtaccggaggatggtatcccgggaggagattgaggtaaatgatgtc
agcaaggagatggacctggatatcatcaaacaaaacagtcaggtggagagagtaatagcg
gagcgagttgttaaagatggttcaggtgaagtagtttcagaatatttggtcaagtggcag
gggctgtcttatgctgaagctacttgggaaaaagacatagatatttcatttgctcaagat
gctatcgatgagtacaagtctcgagaggctgcatcaatggttcaagggaagactgttgat
tttcagcgcaagaaaatcaaaggaagtctcaggaagcttgatgagcagccagagtggctg
aaagggggaaaacttcgagactatcagcttgaaggcctgaactttctcgtcaacagctgg
agaaatgatacaaatgtaattttagctgatgaaatgggtcttggtaaaactgttcagtca
gtttcgatgctgggttttctgcagaattcgcagcaaattcaaggaccatttcttgtagtt
gttcctctatctaccttgtctaattgggcaaaagagtttagaaagtggttgcctgagatg
aatgttattatatatgttggaactcgtgctagccgtgaggtctgccagcaatatgagttt
tacaatgacaaaagagcaggcaggagtactaattttgatactcttttgactacatacgaa
gtattattgaaggataaagccgttctctcaaaaattaggtggagctacctgatggttgat
gaagcacataggttaaaaaacagcgaggcctctttgtatatggcattatcagaatttagc
acaaagaacaagttgctaattaccggcactcccctgcaaaacagtgttgaagagctatgg
gctttgcttcattttctcgatcgtgataagtttaggagcaaagatgactttgttcaaaag
tacaagaatcttagttccttcaatgaaacagagcttacgaatcttcacatggaattgaga
cctcacattctccgaagagtgattaaagatgtggagaagtcattacctcccaagattgaa
cgcatcctgagggttgagatgtctccacttcagaaacagtattataagtggattttggaa
cgtaacttccaagatttgaataaaggagttcggggaaatcaggtctcgcttttgaatatt
gtggtggagttgaagaaatgctgtaatcacccgtttttgtttaagagtgctgaccatggt
tatggcggggatacaaattccctaggtagcacaaaactcgaacgtgttattttgagtagc
ggaaagctggttatactggataaactgcttaatagattgcatgagaccaaccatcgtgtt
cttatattttctcagatggttaggatgttggatatacttgccgagtatctttctctcaaa
gggttccaataccaaagacttgatggtagtacaaaggccgagttacgtcatcaggctatg
gaacattttaatgccccggggagcgaggacttctgttttcttctttcaactcgtgctggt
gggttgggtatcaatcttgcaactgcagacacagttatcatatttgattccgactggaat
ccgcaaaatgacttacaggcgatgagccgagctcatagaattgggcagcaagaagtagtt
aacatttaccggtttgttactagcaagagtgtagaggaagatatattggagcgtgctaaa
aagaaaatggttctggaccatttggttattcaaaaactgaatgcagagggcaaactggag
aaaaaagaaacgaagaaaggaacaacctttgataaaaatgagctttcagcaattctgagg
tttggggctgaagaactctttaaggaagaaaagaatgacgaggaaagcaagaaaaggctt
cttggtatggatattgatgagattcttgaaagggcagagaaggttgaaaataaagaaacc
gaaggagaggaaggacatgaactgttgagtgcatttaaggttgcaaatttcggtagtact
gaagatgatggaacattctggagccgcatgataaagccagaagctgttgcacaagctgaa
gatgctttagctcctcgagcagcacgaaatattaaaagttatgcagaggctataccatct
gaaaagactaataagaggaaaaagaaaggagttgaaactcaggaaagaatgtcaaagaga
cgaagggcagattctgcttactctcctcctgtacttgaaggtgctactgcacaagtgaga
ggatggtcatatgggaatttacctaaaagagatgcaactcgcttttttcgcgcggtcaag
aagtttggaaatgatagtcagataagctcgatagctgcagaagttggtggaacagttgaa
gctgcttcaactgaagctcaaattgagctatatgatgctttaattgatggttgtagagaa
gcaattaaaggagagattatggaccccaagggtccactcttagatttcttcggtgtacct
gtgaaggctgatgaaatcttagagcgtgttgaagaacttcagtcgctcgctaagcggatt
aaccggtatgaagatcctctttcgcaattcagagcactagcatatctcaaaccatccacc
tggtccaaaggttgtggctggaaccagaaggatgatgcaaggctgctgcttggagtttac
tatcatggttttggaaactgggaaaagataaggttggatgcaagccttggtcttacaaaa
aagattgctcctgtggaacttcagcatcatgaaactttcctaccccgagccccacaactg
aaagagcgagctgcactacttttagaaatggaagtcgcagctgttagtggaaagaactct
aatgtgaaagttggccgtaagaatgcaaaaaagcagaaagacgctcttgctatatcagtc
ggtaagggaagacaagggaagcctacttctcctagagggaatattcaaatgaatagaaga
agagctcccaaatcccagaagatggagcctttagttaaagaggaaggtgaaatgtctgat
aatgaggaagtttatgagcagttcaaggaagtaaagtggagggagtggtgtgaagatgtc
atggtagatgaggaaaagactcttaaacgtctccaaaagctgcagtctattagtgcagat
ttgcctaaagataaggtgctttccaaaattcggaattatttgcagcttatcggtcggagg
gtcgaccaaattgttgcagagtatgagcaggagttgtataggcaagaaagaatgaccact
agattgtggaattatgtatctacgttttcaaacttgtccggcgagagacttcagcaaatt
tataccaaacttaaacaggagcaaggtgtaggaccttcggctactgggcacagggatctt
gatgtggagaaattcgaagcttggaaacgaaaaaaaagagctgaagccgatccttctcat
attcagcatccataccaaagacctcctccaaataatgggacctggttacccgatcccagc
tcatctgggattctagggccgccaccatctgagagcagcagacagttacgtaatgggagg
ccttaccggatgcagtaa
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integrated database retrieval system
