Salvia splendens (scarlet sage): 121750835
Help
Entry
121750835 CDS
T07627
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121750835
03036 Chromosome and associated proteins [BR:
sspl03036
]
121750835
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121750835
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121750835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Spt6_S1
Tex_central_region
HHH_9
HHH_3
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
121750835
NCBI-ProteinID:
XP_042001387
LinkDB
All DBs
Position
10:complement(27211716..27219408)
Genome browser
AA seq
1612 aa
AA seq
DB search
MTGKNVISDDEDEIGVDEEERDEEPYGDRGGDRGGDDEDEEDDEEGQDEYENDGFIVNDV
EEEEDEEEDRVDSDEEQKKKKRKKRDQFMLDEDDYELLQESNISVNRSKLESKKFKRLKK
ARRDAEEEPSGFSDEEEFDRSGKGGRTAEEKLKRSLFGDDDGQPLEDIAEEDEQLEEEDD
ADIGEEDEMADFIVDEEEVDEHGTPVRRKKPKKNRQRPGISSSALQEAHEIFGDVEDLLR
LRKIDVRDRFGETSERSLEDQFDPSVLSEKYMTEKDDQIREIDIPERMQISEESTGHPPT
DEFSVKMETEWIYNQLVSGMVPLFNRSGTTNEEVDDELKRHIARFLELIHVQNLDVPFIA
MYRKEEILSLLKDPTDREAGIENDMNQKPTLKWHKVLWAIQDLDQKWLLLLKRKSALQSY
YTKRFEEERRRVYDETRLRLNEQLFQSITKSLEAADSEREVDDVDSKFNLHFPPGEVVLD
EGQFKRPKRKSHYSICSKAGLWEVASKFGYSSEQFGLQISLEKMRMDELEDAKETPEEMA
SNFTCAMFEIPQAVLKGARHMAAVEISCEPCVRRHVRSIFMDNAVVSTSPTPEGNTAIDS
FHQFYGVKWLKDKPLNRFEDAQWLLIQKAEEEKLLQVTIKLPEVVLDKLISDSNDYYLSD
GVSKSAQLWNEQRKLILNDAFNNFLLPSMEKEARSLLISRAKSWLLSDYGRQLWDKVSVA
PYQRKENDANSDEETAPRVMACCWGPGKPATTFVMLDSSGEVLDVLHAGSLSIRGQSVNE
QQRKRNDQQRVQKFMMDHQPHIVVLGANNLSCTRLKEDIYEIIFKMVEDNPRDVGHEMDN
LNIVFGDESLPHLYENSRISVDQLPSQEGIIRRAVGLGRHLQNPLAMAATLCGPGKEILS
WKLNPLENFLTPDEKYWMVEQVMVDVTNQVGLDINLAASHEWLFAPLQFISGLGPRKAAS
LQRSLVRAGAIFTRKDLLQSHGLGKKVFINAVGFLRVRRSGLTSSSSQFIDLLDDTRIHP
ESYILAQDLAKDIYREDGNDDTNDEDDVLEMAIEHVREKPHLLRAVDVHEYAEQKNHLNK
KETLNDIRLELMEGFQDRRRPFVEPSQDEEFCMITGETEEELSEGRIVQATVRKVQGQRA
ICVLESGLAGILSKEDYMDDWRDINELNEKLSEGDILTCRIKSIQKNRYQVFLTCRESEM
RSNRNRSHRMTDPYYHEERGTLQTIQEKARKEKELAKKHFKPRMIVHPRFQNITSDAAIE
FLSDKDPGESVIRPSSRGPSFLTLTLKVYDGVYANKDIVEGGKEHKDITSLLRIGKTLKI
GEDTFEDLDEVMDRYVDPLVAHLKSMLNYRKFRRGTKTEVDELLRIEKAENPMRIVYCFG
ISHEHPGTFILTYIRSSNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQKHIDDSADSTP
SLRSVAAMVPMRSPATGGSSGSGGGWGNSSNDGGWRGGQSSDRDRNSGPRSGRGDYRNGD
GHPSGAPRPYGGRGRGRGRGRGSDSYGNGRDDRQDQDRGSQKWGWKDGDGGGGWGSGFSG
SKAQDSLGGGGNAGEGSSTGWGNWGGDGGGSGADAGNSGWGDAKKSSDGGGW
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaaaaatgtgatctccgacgatgaagatgagattggagtcgacgaagaagaa
agagacgaggagccttatggagaccgcggtggtgatcgtggcggtgacgatgaagatgaa
gaagacgacgaggaaggacaggatgaatatgaaaacgatggatttatagtgaacgatgtt
gaggaagaagaggacgaggaagaagatcgagttgatagtgatgaggagcagaagaaaaag
aaaagaaagaaaagggatcaattcatgcttgatgaggatgattatgaactcctccaggaa
agcaatatatctgtcaatcgttcaaagctcgaaagtaagaagtttaagcgactgaagaag
gctaggagggatgcagaagaagagccttccgggttttccgatgaagaagaatttgataga
agtggaaagggtgggcgtactgctgaggagaagctcaagcgtagtttgtttggtgatgat
gatgggcaacctcttgaggatattgcagaggaggatgaacagcttgaagaagaagatgat
gcagacattggtgaggaggatgagatggctgatttcattgttgatgaagaagaagttgat
gagcatggaacccctgttaggagaaagaaacctaagaaaaacagacagcgcccagggatt
tcctcatctgcactccaggaagcacatgaaatttttggtgatgttgaagatctcctgagg
cttcgcaagatagatgtgcgagacaggtttggtgaaactagtgaaaggagtcttgaagat
cagtttgatcctagtgtgctttctgaaaagtatatgacagagaaggatgatcaaatacgg
gaaatcgatattcctgaaagaatgcagatatctgaggaaagtacaggccatcccccaaca
gatgagttcagtgtcaaaatggagaccgagtggatatacaatcaacttgtcagtggtatg
gtacctttgttcaacaggagtggtactacaaatgaagaagtagatgatgagctgaagcgg
catatagctagattcttggagttgattcacgttcagaatttagacgtcccattcattgct
atgtacagaaaagaggaaatattaagccttctaaaggatccaactgatcgcgaagctggc
attgaaaatgatatgaatcaaaagcctacgctgaagtggcacaaggtgctttgggcgatt
caggacttggatcagaagtggcttcttcttttgaaaagaaaaagtgctctacagtcatac
tatactaagcgatttgaagaagagagaaggagagtgtatgatgagacacgcctaagatta
aatgaacagctctttcagtcaatcactaagtcacttgaagctgctgattcggaaagagaa
gtggatgatgtagactcaaaatttaatttacatttccctcctggagaagttgtcctagac
gaaggccagtttaaaagaccaaagagaaaatcacattacagcatttgtagtaaagctgga
ctgtgggaggttgcaagcaaatttggttacagctctgagcaatttggtttgcagatatct
ctggagaaaatgagaatggatgaattggaggatgctaaagaaacaccggaggaaatggct
tctaatttcacctgtgcaatgtttgagatacctcaagcagtattgaaaggcgcaaggcac
atggcagcggttgaaattagctgtgaaccatgtgttcggagacatgtgcgcagtatcttt
atggacaacgctgtagtgtcaactagtcctacacctgagggaaacacagctattgattct
tttcaccagttctatggagtaaagtggttgaaggacaaaccacttaacagatttgaggat
gctcaatggcttttgattcagaaagctgaagaggagaagctcttgcaagttactatcaag
cttcctgaagtagtccttgataagttgataagcgactcaaatgattattatttgagtgat
ggtgtaagtaaatctgctcagttgtggaatgagcagaggaaactgattcttaatgacgca
tttaacaattttcttcttccttcaatggaaaaagaagcaagatcactgctgataagtaga
gctaaatcatggctactatcagattatgggaggcaattgtgggataaagtatctgttgca
ccataccaacggaaagaaaatgatgccaattctgatgaagaaactgcacccagggttatg
gcttgctgttggggccctggaaagccagctacaacctttgtgatgttagattcatctgga
gaagttttggatgtattgcatgctggttccctcagcattcgtggtcaaagtgtcaatgaa
cagcaacgtaaaagaaatgatcagcagagagtgcaaaagtttatgatggaccatcaacca
catattgtagttttaggagcaaataatttgtcttgtacgcggttgaaggaggacatttat
gagataatcttcaagatggtggaagataatcctcgtgatgttggtcatgagatggataat
ctgaatattgtctttggcgatgaatctttaccgcatctgtatgaaaattctcgtatctca
gttgatcagcttccttcacaagaaggtatcattagacgtgctgtgggtcttggacgtcat
cttcagaatccattagcaatggctgccacattatgtgggccgggtaaagagatattatct
tggaagcttaaccctttggagaactttcttactcctgatgagaagtattggatggttgaa
caagtgatggtagatgtaacaaaccaggtgggccttgatattaatttggctgccagtcat
gaatggttatttgctcctctacaatttatttctggtctaggacccagaaaagcagcttct
ctccagaggtccctagtaagagcaggtgccatcttcactaggaaagacctgctgcaatct
catgggcttggcaaaaaggtttttatcaatgctgttgggttcctccgagtgcgacgtagt
ggattgacttccagtagtagtcaatttattgatctgttagatgacaccagaattcatcca
gaatcatatattctcgcacaagatttggccaaggatatttatcgggaggatgggaatgat
gataccaatgacgaagatgatgtcctggaaatggcgatcgagcatgtcagggagaagcca
catttactgagagctgtagatgttcatgaatatgctgagcagaaaaatcacctgaacaag
aaagaaaccctcaatgacattagattggaattgatggaaggttttcaggatcgtcgcaga
ccctttgtagaaccaagtcaggatgaagagttttgcatgatcactggagagacagaagag
gaactctctgaaggaagaattgtgcaggccacagttcgaaaggtgcagggtcagagagca
atttgcgtcctcgaatctggattagctggcattctcagtaaggaggattacatggacgat
tggagggatatcaacgagttaaatgagaagctgagtgagggtgatattttgacttgcaga
attaaatcaattcagaaaaatcgctatcaggtgtttttaacttgtcgagaaagtgaaatg
aggagtaaccgtaacaggagtcacagaatgacagatccttattatcatgaagaacgcggc
actctgcaaactattcaggaaaaagctcgcaaggagaaggaacttgcaaagaagcatttc
aagccgagaatgatcgttcacccacgcttccaaaatataacgtctgatgctgcgatagag
tttttgtccgacaaggatcccggtgaaagtgtcatacgccctagttctcgtgggccatca
tttttgacattgactctgaaagtttatgatggggtatatgctaacaaggacattgtagaa
ggtggaaaagagcacaaggatataaccagcttgcttcggatcgggaaaacactgaaaatc
ggggaggatacatttgaagatcttgatgaggtaatggatcgttatgtagatccactggta
gctcatttgaagtcgatgctgaattaccgaaagttcaggaggggtactaaaactgaagtt
gatgagctcctcagaattgaaaaggccgagaatcctatgagaattgtatattgctttggg
atatctcatgagcatcctggcacattcatcttgacgtatatacggagttctaatcctcac
catgagtacataggtctctatccaaagggatttaagttccggaaacgaatgtttgaggac
atagaccgtcttgtggcttattttcagaaacatattgatgactcagctgactctactccg
tcgctacgatcagttgctgctatggtgccaatgaggagtcctgcaactgggggctcatct
gggtccggtggtggctggggcaattcatccaatgatggaggctggagaggaggccaatct
tcagacagagacaggaattctggccctagaagtgggaggggtgattacagaaatggcgat
gggcatcccagtggagcacctagaccatatggtgggcgaggacgtggtcgtggccggggc
cgtgggtcagattcttatggtaatggcagggatgacaggcaggaccaagaccgtggttca
caaaagtggggttggaaggatggtgatggtggtggtggatgggggagtggcttctctgga
tcaaaagcccaggattcactgggcggtggtggtaatgctggtgagggcagcagcactggg
tggggtaactggggaggagatggtgggggttcgggtgcggatgcaggtaattcggggtgg
ggagatgccaagaagagttcagatggcggtggttggtga
DBGET
integrated database retrieval system
