Salvia splendens (scarlet sage): 121751240
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Entry
121751240 CDS
T07627
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121751240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121751240
03036 Chromosome and associated proteins [BR:
sspl03036
]
121751240
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121751240
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121751240
Chromatin remodeling factors
BAF complex
121751240
PBAF complex
121751240
GBAF(ncBAF) complex
121751240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
121751240
NCBI-ProteinID:
XP_042001890
LinkDB
All DBs
Position
1:39951985..39963673
Genome browser
AA seq
2220 aa
AA seq
DB search
MQSGGGPQQGGGSGGHGRTNAASASASLSPSSSAGSAFDQQQQQRQQQQHQQQRQSMSQQ
FMKRPEGNDALLAYQAGTIHGPLGAGNFSAASGSMQLPQQPRKFIDLGQQHGSPNNPDQS
HNRSQGVELQMLNPMQQAYMQYAFQSAQHKSTLGMQSQQQVRPAMFGSLGKDQEMSMANM
KMQELMSMQGANQSQGSSSKKPSEQVAQSDKHADNSHRPMLDQRSDTKPNYPPLGGQGIQ
PAPMQAPQSQQNIMSMTNNQMAMAAQMQSMQALALERNIDLSHPANANVVAQLIPLLQSR
MAAQQKANENSTGVPSVSFNKQHVTSPPVGNESSPHGNSSSDVSGQSGSSKARQAVSPST
LGVNSNAAPPNNSSTISAHQFSVQHLPHRQPSSLGHRMPSMQPSQSPGNPNEGVDSFLAK
TSVAESSQAQNARQPNRSPQSATPSNEGDVGNPSTSQGGPSSQLRQLHTGFTKQQLHVLK
AQILAFRRLKQKGDVTLPRELLQAIAPPPLDLQMQQVLSPPANAGKDKLSGETVEVLTKH
MEFSEKGAQDAKSVAGVVNMKTEGSGDDRAATAAASMQNSVSAAKEQRFVGPPGKEEPQY
IGSSGKCEQESEPGNQKTPVRNDVAADRGKGIATQSSASDPVQVKKPIQASNTPQPKDAG
STRKYHGPLFDFPIFTRKHETLGSSMMNNNSNLTLGYDIKDLFADEGREIHKRKRAERIG
KIDKILGVNLERKRIKPDLVTRLQIESKKLQLAECQARLRDEIEQQQQEIMAMPDRPYRK
FVRLCERQRQDLNRQSQANQKATREKQLKSIFHWRKKLLEAHWAFRDARTARNRGVHKYH
EKMLREFSKLKDDDRNKRMEALKNNDVERYREMLLEQQTNVPGEAAERYAVLSSFLSQTE
EYLHKLGSKITATKNQQEVEEAAHAAAAAARAQGLSEEEVRAAAACARDEVSIRNRFSEM
NAPRDSQSVNKYYNLAHAVNERVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILAD
EMGLGKTVQVMALIAHLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKD
QRAKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRESVLARDLD
RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPAHEDDWL
ETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLKCRMSAMQGAIYDWIKSTGT
LRVDPEDEHRKCQKNQNYQAKTYKTLNNRCMELRKACNHPLLNYPYFSDFSKDFLVRSCG
KLWVLDRVLMKLQRTGHRVLLFSTMTKLLDIMEEYLQWRRLVFRRIDGTTSLEDRESAIV
EFNRPDTDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVK
VIYMEAVVGKISSHQKEDEFRSGGVVDSDDDLAGKDRYVGSIESLIRNNIQQYKIDMADE
VINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQM
DEELDWAEDMTRYDQVPDWLRANTQEVNTTIAKLSKKPSKNAVYGGMQPPGEVASEISER
RRGRPKGKTPVYTELDDENGEFSDTSSNDRNGYSVQEEDDGDIGEFEDDESTEAPGVNKD
QSEEDAPVSGDGYEYQRALDNVRNNSILEEAGSSGSSSHSRKLMRMVSPSVSSQKFGSLS
ALDGRPGSRSKKLADELEEGEIAVSGDSPMNQQHSGSWIQDRDEGEDEQVLQPKIKRKRS
IRLRPRHVRAEEKPSDRSSFRRGDPTMLPVHMDNKYKTQASDDRSHKVLGDTSSMKSEKI
DSSIKNKRNLPSRRNTANVQSTLRSGRVNYGSAVAYDSSEHLTENLDTKVVKGPKTSGPK
MSEVVLRKCKTVISKLQRRIDYEGHQIIPQLTELWKRNDYASGDGDCLLDLRKIHNRVDK
SEYSGVMGFVSDVQLMLKSSMQYFGFSYEVRSEAKKVHDLFFDIIGVAFSDTDFREARSS
MSFTAPVSTPATCPSSRQFPSAQGKCQKLVKDVDSEITPFPKTQTRTPIHSVESSKARNL
MPHKDSRLGSNSSRDLGQPDDARPFTHPGDLVICKKKRKDREKSGTKSGNGSAGPLSPTG
IGRGMKSPGSISGAKDIGSSQHGWGPLSPQQGNSSGSSVGWANPVKRMRTDAGRRRPSHL
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggtgggccccaacagggcggaggcagcggtggccatggccggactaat
gccgcatcggcctctgcttctctgtccccatcgtcctctgccgggtccgcatttgatcag
cagcaacaacagaggcagcagcagcaacatcaacagcagagacagtcaatgtctcaacag
tttatgaagagacctgaagggaatgacgcccttctagcataccaagctggcacgatacat
ggacccctgggggcgggcaatttttctgcagcatctggctccatgcagctgcctcaacag
cccaggaagttcattgatttgggccagcagcatggttccccaaataatccggatcaaagt
cataatagaagtcaaggtgttgagctacaaatgttgaatccgatgcaacaagcttatatg
caatatgcgtttcagtcagcccaacataaatctacattggggatgcaatcacagcagcag
gtgagaccagcgatgtttggttctcttggcaaagatcaagaaatgagtatggcaaacatg
aaaatgcaagagctgatgtccatgcaaggagcaaatcagtctcagggttcctcctccaag
aaaccctctgagcaggttgctcagagtgacaaacatgcagataacagtcatcgccctatg
ctcgatcagagaagtgataccaaaccgaactatcctccattaggtggtcagggaatccaa
cctgcacctatgcaagctccacaatctcagcaaaatatcatgagcatgacaaacaatcag
atggctatggctgcacagatgcagtcaatgcaggcactggctcttgagcgtaatattgat
ctgtcacaccctgcaaatgcaaatgtggttgcacagcttatcccactattgcagtccagg
atggctgctcagcaaaaagctaatgaaaatagtactggtgtgccttctgtatcttttaac
aaacagcatgttacctcaccgccagttggaaatgaaagttctccccatggtaattcctca
agtgatgtgtcaggacaatctgggtcatctaaagctaggcaggcagtttcaccaagtact
cttggtgtgaattccaatgcagctccacctaacaattctagcaccatttctgcccatcag
ttctctgtgcagcatttgccccataggcagccatcctctcttggtcatcgaatgccttct
atgcagccttcacagtcacccgggaatccgaatgaaggggttgatagttttcttgcaaaa
acttcggtagcagaatcttctcaggcgcaaaatgccagacagcctaatcggtctcctcaa
tcggcaactccatctaatgaaggtgatgtgggtaatccatcaacatctcagggtggaccc
agttcgcagttgagacaattgcacactggttttaccaagcagcagctgcatgttcttaaa
gcacagatacttgcatttaggcgcctgaagcagaaaggcgatgtaactttgccacgtgaa
ctgctccaagctattgctcctccaccacttgatttacagatgcaacaggtgctttcgcct
cctgcaaatgctggaaaggacaaattatctggagaaactgtagaggtgctgaccaaacat
atggagttcagcgagaaaggggctcaggatgcaaaatcagtagctggagtagttaatatg
aaaactgaaggttcaggagatgatagggctgctactgcagctgcgagcatgcagaactct
gtttctgcagcaaaggagcagaggtttgtgggtcctcctggaaaagaagagccgcaatat
attggtagttctgggaaatgcgaacaggagtctgaaccgggcaatcagaaaactcctgtc
agaaatgatgttgctgcagacaggggtaaaggaattgcaacacagtcaagtgcttcagat
ccagtgcaggttaagaaacccattcaagcaagtaatacaccccaacctaaggatgctggt
tcaacacgaaaatatcatgggccgctatttgatttccccattttcactagaaaacatgag
acccttggatcctctatgatgaacaacaatagtaacttgactttaggttatgatatcaaa
gatctttttgctgatgaaggaagagagattcacaaaaggaaaagggcagaaagaattggg
aaaattgataaaatacttggtgttaacttagagaggaagagaattaaaccagatcttgtt
actcggctacaaattgagtctaaaaaacttcagcttgctgagtgccaggcacgcttgagg
gatgagattgagcaacaacaacaggaaataatggctatgcctgatagaccatatcggaaa
tttgttcgactttgtgaacgtcagcgtcaggatcttaacaggcaatcacaggccaatcag
aaggcaactagggagaagcaactaaaatccattttccattggcgcaaaaagcttcttgag
gcacattgggctttccgtgatgctcgaactgcccggaataggggagtacataagtatcat
gaaaagatgttgagggagttctccaaactgaaggatgatgaccgtaataaaaggatggaa
gccttgaaaaataatgatgtggaaagatatagagagatgcttctggaacaacaaactaat
gtacctggggaggccgcagaaagatacgctgttctctcatcattcttaagtcaaactgag
gagtatcttcacaaattgggcagtaaaataacagccactaaaaatcagcaggaggttgag
gaggcagctcatgcagccgctgctgctgcacgtgcccagggtctctcggaagaagaagtt
agagctgccgctgcttgtgcgagagacgaagtctcgataaggaaccggttttcagagatg
aatgcaccaagagatagtcaatctgttaacaagtactacaatctggcacatgccgtgaat
gaaagggtcataagacagccttcaatgctacgagctggaactctacgagactatcaactt
gttggtctgcagtggatgctatcattatacaacaataaattaaatggaattttggcagat
gagatgggtcttggcaaaactgtgcaggtgatggccttgattgctcatttgatggagttc
aaaggaaattatggccctcatcttattattgtccccaatgccgtgcttgtcaactggaag
agtgaattgcatacttggcttcctagcgtttcctgtatatattatgttggtgggaaagac
caaagggcgaaattgttttctcaagaagtgctagccatgaagtttaatgtccttgtgaca
acctatgagttcatcatgtatgatcgttcaaaactttcaaaaattgattggaaatatatc
gtaattgatgaagcacaacggatgaaggacagagagtcagtattagctcgtgaccttgat
aggtatcgctgccaaaggcgtttgcttcttacagggacaccattgcagaacgatcttaaa
gagctttggtctcttttaaacctactgctcccagaagtttttgataatagaaaagcattt
catgattggttctctcaaccattccaaaaggaagggcctgcacatgaagatgactggctc
gagacagagaagaaggtgataattatccatagactacatcaaatattggaaccatttatg
cttcggcggcgtgttgaagatgtagaaggatcacttcctccaaaggtctcgattgttttg
aaatgtcgaatgtctgcaatgcagggtgcaatttatgattggatcaaatcaaccggcact
ctcagggttgaccctgaagatgaacatcgcaagtgtcaaaagaaccaaaattatcaggct
aaaacttacaaaactctaaacaatagatgcatggagctaaggaaagcttgtaaccatcca
ttgctaaactacccatatttcagtgacttctcaaaggattttcttgtgaggtcttgtgga
aaattgtgggttctggatagagttttgatgaagcttcagagaacgggacacagggtactg
ctctttagtaccatgaccaaacttcttgatataatggaggaatatttgcagtggcgaagg
cttgttttcagaagaattgatgggacgactagcttggaagaccgtgaaagtgctatcgtt
gagtttaatcgaccagacaccgattgttttatcttcttacttagcattcgtgctgctgga
cggggtctcaatcttcagtctgctgacacagtgatcatatatgatccggatccaaaccca
aaaaatgaggaacaggctgttgctcgtgcccaccgtattgggcagacgagggaggtgaaa
gtcatctacatggaagctgtggtcggcaaaatatccagccatcagaaagaggatgaattc
agaagtggaggagtagttgactccgatgatgaccttgctggaaaggaccggtatgtgggt
tcaattgagagcttgattcggaataatattcaacagtataagattgacatggccgatgaa
gttataaatgctgggcggtttgaccagaggactacacatgaagagaggcggctaacttta
gaaacacttttgcatgatgaagaaagataccaagaaacagtacacgacgttccttctctt
catgaggtaaaccgtatgattgctaggagtgaagaagaagtggagctttttgatcaaatg
gatgaagaacttgactgggcagaggacatgactcgatatgatcaggtccctgattggctt
cgtgctaatacacaagaagtaaatactaccattgctaagttatcaaagaagccatcaaag
aatgctgtatatggtggaatgcaacctcctggtgaagtggcttctgagatttctgagagg
aggagagggcggcctaagggaaagactcctgtttatactgaattagatgatgaaaatgga
gaattttctgacacaagctccaatgatagaaatggatattctgttcaagaagaagatgat
ggagacattggggagtttgaagatgatgaatccactgaagcacctggagttaataaagat
caatcagaagaagatgctcctgtttctggtgacggatatgaataccaaagagctttggat
aacgtcagaaacaatagcatacttgaagaagctggctcttctgggtcctcttcgcatagt
aggaagttaatgcgcatggtctcaccttccgtgtcctctcaaaagtttggatcactgtct
gcattagatggcaggcccggctcccgatcaaagaaattggcagatgaattagaagaaggt
gagattgctgtatctggagattctcctatgaaccagcagcattctggtagctggatccaa
gatcgtgatgaaggtgaagatgaacaggtcttgcaacccaagataaaacgaaaacggagt
attcggcttcgcccacggcatgttagggctgaagagaagcccagtgacaggtcatctttt
cgtcgtggtgatcctactatgttaccagtacacatggataataaatacaagactcaagca
agtgatgaccgttcccataaagttcttggagatactagttcgatgaaatcagagaaaatt
gattcatctatcaagaacaaaagaaatctaccatcacggagaaatacagctaatgtgcaa
agtactcttagatctgggagagtgaactatgggtctgctgttgcatatgattcctctgaa
catcttacagaaaacttggacactaaagttgtgaaggggcctaaaactagtggccctaag
atgtccgaggtcgttctgagaaagtgcaagactgttataagcaagctccagagaagaata
gattatgaaggtcatcaaataataccacagctaactgaactgtggaaaagaaatgattat
gccagtggagatggtgattgccttttggatttgagaaagattcacaaccgtgttgacaaa
tctgagtacagtggagtcatgggatttgtgtctgacgtgcagcttatgttgaagtctagc
atgcagtatttcggtttttcatatgaggtgaggtcggaggcgaagaaagtccatgatctc
tttttcgatataattggggtagcattctcagatactgattttcgagaagccagaagttcc
atgtctttcactgctcctgtttctacaccagccacctgtccatcttcacgacagtttcct
tctgctcaggggaagtgccagaaattagtcaaagacgtggattccgaaattactcctttc
cctaagacacagacccgcacacccattcactctgtcgagagctctaaagccaggaacttg
atgcctcacaaggattcgaggcttggaagcaacagcagtcgggatcttggccaaccagat
gatgctcgccctttcactcacccaggagatctcgttatctgcaaaaagaagaggaaagac
agggagaagtcgggtacgaagtctggaaacggttcagcaggtccattgtcacctacaggc
attgggcgtgggatgaagagtccagggtcaatctcaggcgctaaagatattggctcgagc
caacatggctgggggcccctttcccctcaacaagggaacagcagcggcagctccgtcggc
tgggcgaatcctgtaaagagaatgagaactgacgctggaaggcggcggcctagccattta
tga
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integrated database retrieval system
