Salvia splendens (scarlet sage): 121751279
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Entry
121751279 CDS
T07627
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121751279
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121751279
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121751279
NCBI-ProteinID:
XP_042001929
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Position
10:complement(8320013..8321877)
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AA seq
436 aa
AA seq
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MDPIRFMLVFLISVVALVTTKANNTETDDVVWRERALQARQANQQAYEPNPHIILNHFNR
HVHKAFEGYNSTRRGLSKHHSGPCEATNPIDQCWRCDPHWEKNRKKLADCVLGFGRHTTG
GKAGKIYMVTDPSDNDLVNPKPGTLRHAVIQTEPLWIIFAHHMVIRLSQELIFTCNKTID
GRGAQIHITKGAGFMIQYVSNVIIHNIKIYDIKVGSGGLVRDSITHYGQRGQSDGDAVSV
FGSSNIWLDHLSLSSCYDGLIDVVKGSTAVTISNCHFARHNDVLLFGASDSYSDDKIMQV
TVAFNHFGKGLIQRMPRVRYGFVHIVNNDYTKWEMYAIGGSQGPTLLSQGNRFFAPDNRN
AKEVTKREYTTESVWKNWVWKSEGDVLQNGAFFIQSGDPHHKFVHGPDYIPPKPGQFAST
LSRHSGHLKCIPGLPC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatcctattaggtttatgttggttttcttgatttctgtcgtggccttggtcacaaca
aaggcaaacaatactgagacagacgacgtcgtatggcgggaacgtgcattacaagcgagg
caagctaatcaacaggcgtatgaaccaaatcctcacattatcctaaatcattttaacaga
catgttcacaaggcatttgaaggttacaactcgacaagaagaggtctaagtaagcaccat
agtgggccatgcgaggccacaaaccctattgaccaatgttggaggtgtgacccacattgg
gaaaaaaaccgcaaaaagctagccgattgtgtcctagggttcgggcgccacaccaccggg
ggcaaggcgggaaagatctacatggtgacggacccctcagacaacgacctagtcaaccca
aagccgggaaccctaaggcacgcggtgatccagacagagccactctggatcatattcgcg
caccacatggtgatccggctctctcaggagctgatcttcacgtgcaacaagaccatcgat
gggcgcggggcccagatccacatcacaaagggagcgggattcatgatccaatacgtgagc
aacgtgatcatacacaacatcaagatctacgacatcaaagtgggcagcggaggcctcgtg
cgagactccatcacccactacgggcagcgtgggcagagcgacggcgatgctgtctccgtg
ttcggatccagcaacatttggcttgaccacttgtccctatctagttgctatgatggccta
atcgatgtggtcaaagggtcgacggctgtcaccatctcaaattgtcatttcgctcgccat
aatgatgttttgctatttggagcaagcgatagctactcagatgacaagataatgcaagta
acggtggcgtttaaccattttgggaaaggtttgattcaaagaatgccgcgagtgaggtat
gggttcgtgcacattgtaaacaacgactacacaaagtgggaaatgtacgcgataggagga
agccaaggccccaccttacttagccagggcaaccgcttctttgccccagataataggaac
gccaaagaggtgactaagagagagtatacgacggagagtgtgtggaagaattgggtgtgg
aaatcggagggagatgtgttgcaaaatggcgcgtttttcatccaatcgggagatccgcat
cacaagtttgtacatggccccgactatattccacctaaaccgggccaatttgctagcacg
ctgtcgcgacactccggacatttgaaatgcattcccggtctaccttgttaa
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