Salvia splendens (scarlet sage): 121751293
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Entry
121751293 CDS
T07627
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121751293
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
121751293
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
121751293
NCBI-ProteinID:
XP_042001945
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All DBs
Position
1:40017212..40027588
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AA seq
1121 aa
AA seq
DB search
MYMAYGWPQVIPLELPNCPSTQQIVYLKVVNSLLLVVAPTHIELWSSSRHRVRLGKYKRD
VDSIQREGENLRAIWSPDTKLIAVLTSSFHLHIFKVQRAETKIYIGGKQPTGLFLSNISL
VLNEQVPFANKNLTVSNFACDNKHMLIGLSDGSLYTISWKGEFCGAFFLDMLPNDGNDLN
KLSNHYSNGTVASGGQMDDGPNHTNHVVSQTSGIVHLEFSITLRLLFVLFSDGDLIQCSV
SKRGLKHAESVIVEKRFASGEAVCASVAPDQQILAVGTQKGAVELYDLADSASLIRSVSL
HDWGYSVEDTGPVNCIAWTPDNSAFAVGWKLRGHTVWSVSGCRLMSTIRQIGLSSVSSPV
VKPNQDFKYEPMMGGTSLMHWDEHGYRLYAMEEGSSERIIAFSFGKCCLNRGVSGTTYVR
QVIYGEDRLLIVQSEDTDELKILHLNPPVSYILQNWPILHVAASKDGMYLAVAGLHGLIL
YDIRLKRWRVFGDVTQEQQIQCRGLLWLGKIVVVCNYVESSSTYELLFYPRYHLDQSSLL
CRKPLLTNPMAMDVYQDYLLITYHPFDVHIYHVKITGELSPSSSPDLQLSTVRELSIMTA
KSHPAAIHFIPDQLPHDDMSRSDTSSTHEPSKCLILRINGDLSLLDLDDGRERELTHSVE
LFWVTCGQLGEKTNLIEEVSWLDYGHRGMQVWYPSLGDDPFKQEDFLQLDPELEFDREVY
PLGLLPNAGVVVGVSQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKREEALRLAQ
LSAEKPHFSHCLEWLLFTVFDAEISRQYSSKNQSAVANNTPSLLKKSCELIRNFPEYYDV
VVSVARKTDGRHWANLFSAAGRSTELFDECVQQRWYRTAACYILVIAKLEGPAVSQCCAL
NLLQATLNESLYELAGELVRFLLRSGREYEHSSTDSERDSPRLLGYFLFPSSFRKQSNDA
KSPSSKEPSAHIASVKNILESHANYLMSGKELSELVAFVKGTQFDLVEYLQRERYGSARL
EDFASGLEMIGQKLHMGTLQNRLDAEFLLANMCSVKFKEWIVVLATLLRRSEVLYDLFRH
NLQLWQAYSRTIQAHETFAEYHDLLEELEGRLSLTAYAEDT
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatggccgcaggtcatccctctcgaattgcccaactgtccttcc
acacagcagatcgtgtatcttaaagtcgtcaatagcttgctccttgttgtggcgccgact
cacatcgagctctggtcgtcttctcggcacagagtgaggttggggaagtataagagagat
gtggattctattcaaagagagggggagaatttgcgggcaatttggagccccgacactaag
ctcattgctgttcttacatcgtcctttcatcttcacatttttaaggttcaaagggcagaa
acaaaaatatacattggtggcaagcaaccaactggtttatttctctcaaacatttcctta
gttctcaatgaacaagtcccttttgcaaacaagaatttgacagtgagcaactttgcttgt
gacaacaaacacatgctgattggactatctgatggatcactgtatacaatatcttggaag
ggtgagttctgtggtgcctttttcctcgatatgttgccgaatgatggaaatgatctgaat
aagttatccaatcactatagcaatggtacagttgccagcggaggtcaaatggatgatggt
cccaaccacacgaaccatgtcgtatctcagacttctggaattgtccatcttgaattttcc
attactttgcggttactttttgtgctgttttctgatggggatctaattcaatgttctgtg
agcaagaggggtctaaaacatgctgaatcggttatagttgaaaagcgatttgcttcaggg
gaagctgtatgcgcatcagtggctccagatcaacagattcttgctgttgggactcaaaaa
ggtgctgttgagctgtatgatcttgcagattctgcatcgcttattcgctccgtgtcattg
catgattggggatattctgtggaagatactggccctgtcaattgtattgcttggacacct
gataattctgctttcgcagttggatggaagttaaggggacatactgtttggtctgtctca
ggctgtcgtttgatgtctacaatccgccagataggtttgagctctgtatcttctcctgtg
gtgaagccaaatcaggattttaagtatgagcccatgatgggaggcacatcgctgatgcac
tgggatgaacatggatataggctttatgctatggaagaaggatcttcagagagaattatt
gcattttcttttggaaaatgctgcctaaataggggtgtttctggtacaacttatgtacgc
caagttatttatggtgaagaccgcttgcttattgtacagtctgaagataccgatgaactt
aagatcttgcacctcaatcctccagtatcttatattttgcaaaattggcctattcttcat
gttgctgccagtaaggatggaatgtatttggctgttgctgggcttcatggtttaatcttg
tacgacattcgactaaagaggtggagagtgtttggagacgttactcaggaacaacagatt
cagtgcaggggattgttatggctgggaaaaattgttgtggtctgcaattacgtggaatct
tcgagcacatatgaattgcttttctacccaagatatcacctcgatcaaagttcactactt
tgccggaagccattgcttacaaatccaatggccatggatgtttatcaagattatttgctc
atcacttaccatccgtttgatgttcatatataccatgtgaaaataactggcgaattgtca
ccttcaagctctccagatttacagctttctacagtacgagaactttcaatcatgactgcg
aagagccatcctgctgctattcattttattcctgatcagcttccacatgacgacatgtca
agaagtgatacatcatcaacccatgagccttctaagtgtttaatactgcggattaatggg
gacctttcactacttgatttggatgatggccgggaaagagagctcactcactctgtagag
ttattttgggttacctgtggtcaattgggggagaaaactaacttaattgaggaagtttcc
tggttagactatggccatcgggggatgcaggtttggtatccatctttaggtgatgatcca
tttaaacaggaagactttttacagttggatccggagctggaatttgatcgcgaggtatat
cctcttggtctacttcctaatgctggtgtagtagttggtgtttcccagagaatgtcgttt
tcagcatgtacagagttcccatgttttgagccgtctcctcaagctcaaaccatattacac
tgtctactacgacatcttcttcagagggacaagagggaagaagctctacgccttgcccaa
ttatcagcagagaagccacatttttctcattgcctggaatggcttctatttacagttttt
gatgctgaaatttccagacagtattcaagcaaaaaccagtctgctgtagctaacaacact
ccctctcttctgaagaagagctgtgaattgatcagaaacttccctgaatattacgatgtt
gttgttagtgtagcacgcaagactgatggtcgtcattgggctaatttattttctgctgct
ggcagatcaactgagttgtttgacgaatgtgttcagcaaagatggtaccgcactgcagca
tgctatatacttgtcattgctaagcttgaaggtcctgcagtgagtcaatgttgtgctttg
aatttattgcaggctacacttaacgagtctttgtacgaactggctggagagctggtgagg
tttctacttaggtctggaagagaatatgaacactctagtacagattctgagagagattct
ccaagactcttaggatattttcttttcccgtccagtttcaggaagcaatcaaatgatgca
aaaagcccctcgtcgaaagagccgagtgcacatattgcttctgttaaaaatattcttgaa
agccatgccaactatttgatgtctggaaaagagctttcagaacttgttgcatttgtcaaa
ggcacacagtttgatctggtggagtatcttcaacgagaaagatatggaagtgctcgtctg
gaggactttgcctcagggcttgaaatgattgggcagaagctgcatatgggaacgctgcaa
aatcgtttggatgcagaattcctcttagcaaatatgtgctctgtcaaatttaaggaatgg
atcgtggtcttggccacattattgaggcgctcagaggttctctatgatttatttaggcat
aatttgcagttgtggcaagcatacagccggacgatacaggcacatgaaacttttgctgaa
taccatgacttgttggaagagctggagggaaggctctcgttaactgcatacgctgaagat
acatga
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