KEGG   Salvia splendens (scarlet sage): 121751653
Entry
121751653         CDS       T07627                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121751653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sspl03041]
    121751653
   03036 Chromosome and associated proteins [BR:sspl03036]
    121751653
Spliceosome [BR:sspl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121751653
 Complex B
    121751653
 Complex C
   U2 SnRNP specific factors
    121751653
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    121751653
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N
Other DBs
NCBI-GeneID: 121751653
NCBI-ProteinID: XP_042002385
LinkDB
Position
10:complement(27139257..27143634)
AA seq 1258 aa
MDDDLEIQRLKEERQKMEKDLAALTSLTFDTDLYSSNKFEGYEQSIAVNEDDDNADPAEN
EIARKMASFTAPKQYYKETLRSGEEDEMSGFKQPGKIIDREDDYRRRRLNRIISPERNDP
FQDKTPGPEVRTYVDVMKEEALKRKEEEVRREIAKRKKEEEENKEKDKDVEKPKKRNRWD
MSQDENAGGTKKSKAASDWDMPDSTPGIGRWDATPTPGRIGDATPSLSRKNRWDETPTPG
RLNDSESTPAGGVTPGATPAGMAWDATPKLGGLATPTPKRQRSRWDETPATMGSATPGAT
PAAAYTPGVTPFGAVDMATPTPNALMRSAMTPEQYNLLRWEKDIEERNRPLTDEELDSMF
PEEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYNIPEENRGQQFDVPKELPGGLPFM
KPEDYQYFGSLLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARELG
AGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDY
YARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPF
LKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITAL
SLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAIYASYYTK
EVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFFRNFWVRRMALDR
RNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDAR
LEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAK
VRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM
TKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEML
KAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF
TVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQ
TAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVV
LNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPVLEDEDSNVFSRPELHMFV
NT seq 3777 nt   +upstreamnt  +downstreamnt
atggatgacgatttggagattcaaaggttgaaagaagaaaggcaaaaaatggagaaggac
cttgctgcactcacttctctaacctttgacactgatctctatagttcaaacaagtttgaa
ggctatgaacaatctatagctgtgaacgaggacgatgataatgcggatccagctgagaat
gagattgctcgaaagatggcttcatttactgctccaaagcaatattataaggagactctg
aggtccggggaagaggatgagatgtctgggttcaagcagccaggaaagattattgaccgt
gaagatgattataggaggagaaggttaaataggattatatctccagagagaaatgatcct
ttccaggacaagacccctggtcctgaagtgaggacttatgttgatgtgatgaaggaagaa
gcgctgaagcgtaaggaagaggaggtgaggagggagatagcaaaaagaaagaaggaagag
gaggagaacaaggagaaggacaaagatgtggagaagccaaagaagaggaatagatgggat
atgtcccaagatgagaacgctggtggtacaaagaaatctaaggcagcatctgactgggat
atgcccgactcaactcctggaattgggaggtgggatgcaacaccgactcctgggaggatt
ggggatgcaacaccctcgctctctaggaaaaatagatgggacgagactccaacccctggg
cgccttaatgattctgaatcaactcctgctggaggtgttacacctggagcaacacctgca
ggaatggcttgggatgccacacctaagctgggagggctagccactccgaccccaaaacgg
cagagatccaggtgggacgagactccagccactatgggtagtgctactcccggtgcaaca
cctgctgcggcatatacccctggtgtcactccttttggggctgttgatatggctacaccc
acaccaaatgctcttatgcgaagcgcgatgactcctgaacaatataatctcttaaggtgg
gagaaggacattgaggaaaggaataggccactgactgatgaggagctggattcaatgttt
ccagaagaagggtataagattttggaaccccctgcctcctatgttcctatcagaacccct
gctaggaagcttcttgctacaccgactccaatgggaacacctctttacaacattccggaa
gagaatcgaggacagcagtttgatgttcctaaagagttgcctggtggtttgccatttatg
aaaccagaagattatcagtactttggctcgctgctgaatgaagaaaatgaagaagagctg
tctccggaagagcagaaggagcgtaagatcatgaaactcttgctgaaagttaaaaatggc
actcctccacagaggaagactgctctgagacagcttacagataaggcaagggaattgggt
gctgggcctctgttcaaccgtattctgccactgcttatgcagcccacgttggaagatcaa
gagagacacttgctggtaaaagttattgatagggtgctctacaagttggatgaactggtt
cgtccttatgtccacaaaattttagtggttattgagcctttgttgattgatgaagattac
tatgctcgtgtagaaggtagagaaatcatctcaaatctgagcaaggcagctgggttggcc
actatgattgctgcaatgcgtccagatattgataacatagatgagtatgttagaaacacc
actgctagagcttttagtgtcgttgcctctgcccttgggattcctgctctgttgccattc
ttgaaagctgtctgtcagagtaagaagtcatggcaagcgcggcacactggtatcaagatt
gtgcagcagattgctattttaataggctgtgcagttcttccccacttgagatccctcgtt
gagatcattgagcacgggcttaatgatgaaaatcagaaagtcagaacaataacagctctg
tctctggctgctcttgctgaggctgctgctccatatggtattgaaagctttgactctgtg
ttgaagcctctatggaagggtataagatctcatcgtgggaaagtacttgctgctttcctt
aaggccattggtttcatcataccgctcatggatgctatatatgctagctactatacaaag
gaagtcatggttattctgattcgtgaattccagtctccggatgaagaaatgaagaagatt
gtgctgaaagtggtgaagcagtgtgtgagtacagaaggtgttgaggcagaatacatcaga
aatgatatccttcctgaattcttccgcaatttttgggttcggaggatggccttggataga
agaaattataagcaacttgtggagacgacggttgagatagctaacaaagttggggttgct
gatatagttggaaggattgttgaagacctgaaagacgaaagtgagccatatagaaggatg
gtaatggagacaattgagaaggtggttgccaacttgggggcatctgatattgatgctcgc
ttggaggagctattaatcgatggcattctttatgcattccaagaacagactagtgatgat
gctaatgttatgcttaacggttttggtgctgttgtgaactcccttggccagagagtgaag
ccatatcttccccaaatatgcggtaccataaaatggcgtcttaacaataagagtgcaaaa
gtgaggcaacaagcagcagatcttatatctaggattgccgtggttatgaaacagtgtgga
gaagaacaactgatggggcatcttggcgtcgtgttgtacgagtatctgggggaggaatat
ccagaggttttgggttcaatacttggtgctctcaaggctattgtcaatgttattggtatg
accaagatgactccacctattaaagatttgcttcctcggctgacacctatattgaagaat
cgtcacgagaaagtccaagaaaattgtattgatctcgttggaagaattgctgatcgtgga
gctgaatttgttcctgcaagggagtggatgaggatatgcttcgagctcctggagatgctc
aaagcacacaagaagggtatccgcagagcaacagtcaacactttcggttacattgctaag
gccattgggccgcaagatgttctcgcaacattgctgaacaacctcaaggttcaagaacgt
caaaatcgtgtgtgcacgactgtggccatagcaattgttgcagaaacatgctcaccattc
acggtccttcccgcattgatgaacgaataccgcgtccccgagctgaacgtgcagaatggt
gtcttgaaatcgctgtctttcctgtttgaatacatcggtgaaatgggaaaagactacata
tacgcagtgactcccctgctggaggatgcactgatggacagggatctagttcatcggcaa
actgcagcatcagctgtgaagcacatggctcttggtgttgcaggccttggatgcgaggat
gctctggtccacctcatgaactacgtatggcctaacatttttgagacgtcgccgcatgtg
atcaatgctgtgatggaagctatcgaaggcatgagggtggcattgggtgctgccgtggtg
ctaaactactgtctgcaggggctgttccatccagcaaggaaggtcagagaagtgtactgg
aagatctataattcgctctacatcggtgctcaagatgcgctcgttgcttcgtatcccgta
ctcgaggatgaggacagcaatgtattctctaggcctgaactgcatatgtttgtctga

DBGET integrated database retrieval system