Salvia splendens (scarlet sage): 121751673
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Entry
121751673 CDS
T07627
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121751673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121751673
03051 Proteasome [BR:
sspl03051
]
121751673
Membrane trafficking [BR:
sspl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121751673
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121751673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
XPC-binding
UBA_NBR1_C
Dsc3_N
Rad60-SLD_2
UBA_HOIP
RPN13_C
Motif
Other DBs
NCBI-GeneID:
121751673
NCBI-ProteinID:
XP_042002411
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All DBs
Position
10:15252690..15257385
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AA seq
542 aa
AA seq
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MAAEADSSTGVAAIEEVNVNIRCSNGSKFSVKTNLESTVAEFKGVLAQNCDVPADQQRLI
YKGRILKDDQTLVSYGLQADHTIHMVRGSAPASAPSPAPVPTGPGNTTTTPAATQGGGPT
PGGTGLGGTGASLFPGLGLGGLGGTGGASGGLFGAGLPEFEQVQQQLTQNPNMMRDIMNM
PAIQSLMNNPEIMRSLIMSNPQMREIIDRNPELAHILNDPSVLRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTIGGNAVTDAGSNPFAALLGNQGGI
QTRDGANSTTATETGTAVPNANPLPNPWSNTGGSQTMNATRTNPTGDARPPPTTGLGGLG
LPDLGSTGLGDPAAYSQLLQNPAVSQMMQSLLSNPQYMEQIMGMNPQLRSMLDMNPQLRE
MMQNPELLRQLTSSDMMQQMMALQQQLTRQQSTPEGDQTNQNRGPQNNMGLDMLMNMFGG
LGAGGFAVPNAPDVPPEELYATQLSQLQEMGFFDTQENIRALRATAGNVHAAVERLLGNL
GQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaggcggactccagcacgggggttgcggcgattgaggaggtgaacgtaaac
atccgatgctcaaacggctctaaattttcggtgaaaacgaacctcgaatcgacggtggcg
gaattcaaaggtgttttggcgcagaattgcgatgtgccagctgatcaacagcggttgatc
tacaagggccggatcttgaaggatgaccaaaccctagttagctatggtttgcaggcagat
cacactattcacatggttcgtggttctgcaccagcttctgcaccttctcctgctcccgtt
cctactggtcctgggaacaccaccactactcctgctgccacacaaggtggtggtccgact
cctgggggtactgggttgggtggtacgggtgcatccttatttccagggcttggcttaggt
ggactaggtggtactggaggggcatctggtggattatttggagctggacttccagaattt
gaacaggtgcagcaacaactaactcagaatcctaacatgatgagggacataatgaacatg
cctgccattcagagcttgatgaacaaccctgagattatgcgcagcctaattatgagtaac
cctcaaatgcgtgagataattgatcggaaccccgaacttgctcacattctgaatgatccc
agtgtccttcggcaaacattagaagcagcaaggaaccctgagctaatgcgtgaaatgatg
agaaacactgacagggcaatgagcaacattgaatcatctcctgagggattcaacatgctt
aggcgcatgtatgaaaatgtacaagaacccttcctgaatgcaacgaccataggtggtaat
gctgtgactgatgctggatcgaatccatttgctgcactcctggggaatcaagggggcata
caaactagagatggagcaaattcaacaactgcaacagaaacaggaacagctgttccaaat
gctaacccacttcctaatccatggagcaatactggaggctctcaaacaatgaatgctacc
agaactaatccaactggcgatgcgaggccacctccaactaccggactgggaggacttggt
cttcctgatttagggagtacaggcttgggtgatcctgctgcatacagtcagttgttgcaa
aatccggctgtgtcacagatgatgcagagcttgctttccaaccctcagtacatggaacaa
atcatgggcatgaaccctcaactacgcagcatgcttgacatgaaccctcaattgagagaa
atgatgcaaaatccagaacttcttcgacagttgacttcgtctgatatgatgcagcaaatg
atggctttgcagcaacaacttactcggcagcagtcaactccggaaggagaccagactaat
caaaatagaggaccacaaaacaatatgggtttggacatgctgatgaatatgtttggtggg
ctcggagctggtggctttgctgttcctaatgcccctgacgtgcccccagaagaactgtat
gcaactcagctatcacagctccaagagatgggtttctttgacactcaagagaacatcaga
gcactccgtgccactgcaggaaacgtgcacgcagctgttgaacgacttctaggaaacctc
gggcaatag
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