KEGG   Salvia splendens (scarlet sage): 121751844
Entry
121751844         CDS       T07627                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03013  Nucleocytoplasmic transport
sspl03015  mRNA surveillance pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121751844
  09122 Translation
   03013 Nucleocytoplasmic transport
    121751844
   03015 mRNA surveillance pathway
    121751844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121751844
   03041 Spliceosome [BR:sspl03041]
    121751844
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121751844
Spliceosome [BR:sspl03041]
 Complex C
  Other components
   EJC/TREX
    121751844
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 121751844
NCBI-ProteinID: XP_042002574
LinkDB
Position
10:complement(5257267..5259625)
AA seq 195 aa
MANAEAEAVDFEPEEDDLMDEDVGDGSPNRATAPRLKSAITGGGSAPKKTKGRGFHDEAA
AEADRNARMSAPFDSLDSEGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNL
HLNLDRRTGFVKGYALIEFEKFEEAQRAISEMDGAELLTQIMNVDWAFSKGPFRRRNIRR
RSPRGHRSRSPRRRF
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgaatgcagaagcggaggccgtcgatttcgagccggaggaggacgatcttatggac
gaggacgtcggcgacggctcccccaaccgagccaccgctcctcgcctgaagtccgccatc
accggcggcggctccgctccgaagaagaccaagggccgcgggtttcacgacgaggctgct
gctgaagctgaccgaaatgctcgcatgtctgcccccttcgattcgctcgattcagaaggc
ggtcctggtcccgaacgatctattgaaggatggattattctggttactggagttcatgaa
gaggctcaagaggacgatctacaaaatgcatttggtgattttggagagataaagaattta
cacttgaatcttgatcgtcgtacgggttttgtcaagggctatgctctaattgaatttgag
aagtttgaggaggcacagagagccataagcgagatggatggagctgaactcctaacccag
atcatgaatgttgactgggcgttcagcaaaggtccattcaggagaaggaacatcaggagg
agatcacctcggggccatcggtccaggagtccaaggaggagattctga

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