KEGG   Salvia splendens (scarlet sage): 121751877
Entry
121751877         CDS       T07627                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121751877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121751877
   03041 Spliceosome [BR:sspl03041]
    121751877
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121751877
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121751877
Spliceosome [BR:sspl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121751877
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 Thioredoxin_15
Other DBs
NCBI-GeneID: 121751877
NCBI-ProteinID: XP_042002608
LinkDB
Position
10:19930460..19934265
AA seq 503 aa
MARKRKTRAAELPQDPEIEQQEEPEPEPEVKVEEVEPEQTVGEEEEEEGEGEEEEEEEEE
EEEAVDEEEEQSDNMEEHKDEDIPETSAEIKAEIKEEPSENVISENGGGAGAQGEDEDFE
EEPLEKLLEPFSKDQLTLLIKEALEKHPDLSEIVHRMADSDPAHCKIFVHGLGWDANAET
ITSVFGKYGEIEDCKVVRDKNTGKSKGYGFILFKNRDGARRALKEPQKLIEGRMTSCQLA
SAGPVQTPVQTAAPSVSVPPTSEYTQRKIYVSNVSAELEPKKLLDYFSKFGEIEDGPLGL
DKQTGKPRGFCLFVYKSIESAQKALDEPHKHFEGQILHCQKAIDGPKHSKGHFNQQHGQQ
QPQLQQHHHQGHQGYYHHQAKKGRYAGSGGVGHTGGHLMAPSAGPAVPSVGFNPAVAPAA
IGQAVAALLATQGAGLGIGNLLGGIGNPQGVPPMMNNAGYGGQGAGGYGGQPGMQGGYGG
QPQMGQGGVRPHQGGAPYMGHGH
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggctcggaaacggaaaacccgcgctgctgaactccctcaggaccccgagatcgagcag
caggaggagcccgagcccgagcctgaggtcaaggtcgaggaggttgagcccgagcaaaca
gtaggagaagaggaagaggaagaaggggaaggagaggaggaggaggaggaggaggaagaa
gaagaagaagcggtcgacgaggaagaggagcaatcggacaacatggaggaacacaaggac
gaggatattccggagacgagtgccgaaattaaagctgaaattaaagaggagccctccgag
aacgtcatttcagagaatggcggtggtgctggtgctcaaggggaggatgaggattttgag
gaagagcctttggagaagcttctcgagcccttctctaaggaccagctcactcttctaatc
aaagaagcgcttgaaaaacacccagatctatctgagattgtgcacaggatggccgactcc
gaccctgcccactgcaagatttttgtgcacggccttggttgggatgccaatgcggagacg
attacgtcggtgtttgggaagtatggcgaaattgaggactgtaaggtggttagagataag
aataccgggaaatcgaagggatatggtttcattcttttcaagaaccgcgatggggctcgc
cgcgccctaaaggaacctcagaagttgattgaaggccggatgacttcttgccaactggcg
tcggctgggccggttcagactcccgtgcagactgcagcaccgtccgtttctgtaccacct
acgtcggagtacacacagaggaagatatacgttagcaatgtgtctgccgaacttgagccg
aaaaagcttttggactacttctccaaatttggggagatcgaggatgggcctttgggtttg
gataaacagactggaaagcctaggggtttctgtttgtttgtgtataagagtattgagagt
gcgcaaaaggcactggatgagccgcacaagcattttgagggtcagatactgcactgccag
aaagcaattgatggcccaaaacacagcaagggtcacttcaaccagcagcatggtcagcag
cagccgcagctgcagcaacatcatcaccaggggcaccaagggtattatcatcatcaagct
aagaaagggagatatgctggtagtggtggtgtggggcatacaggtggacacttgatggct
ccaagtgccggacctgctgttccttctgtagggtttaatccagcagttgcccctgctgct
ataggacaggctgtggcagcactgctggccactcaaggggctggattgggaattggcaat
ttgctcggggggattggaaatccacagggtgtaccacctatgatgaacaatgcaggttac
ggaggtcagggtgctggtggctatggaggtcaacctggtatgcaagggggttatggtggc
cagccacagatgggtcagggtggtgtaaggccacatcagggtggggcaccctatatgggt
catggtcactag

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