KEGG   Salvia splendens (scarlet sage): 121752081
Entry
121752081         CDS       T07627                                 
Name
(RefSeq) dicer-like protein 4 isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
sspl  Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sspl03036]
    121752081
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    121752081
   microRNA pathway
    RISC loading complex
     121752081
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 IstB_IS21
Other DBs
NCBI-GeneID: 121752081
NCBI-ProteinID: XP_042002894
LinkDB
Position
10:9934173..9971921
AA seq 1627 aa
MDAGDSFSAEVNGISERLMSLPIDGDEEQQIPVKSEKDPRKIARKYQLDLCKKALEENVV
IYLETGCGKTHIAVLLIYEMGHLIKKPQKNICIFLAPTVALVQQQAKVIANSIDFKVGIY
CGSSAQVKSPHYWKKEVEENEVLVMTPQILLHNLSHCFIKIEVIALLIFDECHYAQLDSN
HPYSEIMKIFYKTDVVKLPRICGMTASPKSGKGGSIDGLEALLRAKVYTVEDKDELEKFV
TSPKVNVYYYSSEDGMSLPHIIYARKLEEIKNQSMSALRINSLDQSTLMSTKKQLQKLHC
NLIFCLENLGLWGALQASHIFLKGDHFENTEVVEEESSSESNLCNKYLHQVVSVLASDCT
GDGKEADLSTVEVLKEPYFSKKLLRLIGILSSFRLQPNMKCIIFVNRIVTARSLSHILRN
LKFLSAWKCGFLVGVHVGLVSRKNTNIILDKFRSGELNLLVATKVGEEGLDIQTCCLVIR
FDLPETVASFIQSRGRARMPQSEYAFLVDRGNLKELGLIEHFKKDEALMNEEISLRKSSN
LITSFEERTYKVDTTGATISSIMSISLLHHYCSKLPHDEYFQPKPQFFYFDDIDGMVCTI
ILPANAPIHQIVSSPQSSTDAAKKDACLRACKALHEIGALTDYLLPEQDDKHEELTEDLS
DSGGSSEEDSRAELHEMLVPAALRKPWTEPQSSTCFSCYYIDICPTPADRDYRRFGLFMK
DPLPEGAGQMKVELCLARGRMVRSQLIPYGVTRFHKDEIAAAEMVQKMFLQIILDRHKFV
SEYVSLKNDDVYNSSSATFYLLLPLEPIKHGSISVDWALIKRCLSSPIFKLSRLDVGDQT
SQSSKYLHLSNGHFSSDDVVNSLVYVPCNRKFFFISAVYWEKNGYSLHGASKDHVQHYKE
KFDIHLAYPDQPVLKAKQLFLLENLLRKKKLTEEWREKEEHSFELPPEICQLKVIGFSKD
IGSSLSLLPSIMHRLESLLVAIELKEKLAESFPEGAEVTTARVLEALTTEKCSESFSLER
LEVLGDAFLKFAVGRCLFLKHDALDEGQLTRRRSNIVNNSNLLKLATAKKLQVYIRDQSF
EPDKFYAFGRPCPLNCTKETQEHIHSDYSKNNDKNSGVRCNKCHHWLYNKTIADALEALT
GAFIVDSGFKSATAFLKWVGVEVDFTLPKIDNICSASESFLPLSSEIDVKALENLVGYKF
SHKGLLIQAFVHPSFNNLLGGCYQRLEFLGDAVLDYLITSYLYSVYPSLKPGHLTDLRSA
CVNNTSFADVAGKWSFHKYMICDSSVLREAIDKYVNTGKSGTEKEHIEEKACPKALGDLV
ESFTGALFLDTGFNLELVWKTMLFLLDPIVSISKLECNPLREIYELSQSYNWDLQFSSSK
KDNKFRVEAKVDDKNVSASALAINISGKAAKRVAARQLFESLKAQGYKTKSPSLKEVLTK
SEVRAAKLIGYDETPSTGTAKSGGVEDFGSDDVAQDYEVRNISTLKPKPISRPIELLSHC
KSPEVCVTQPPSSSFRSDLPAAKLSNGSNSNGKGAPTNVCAKSRLYELCTANCWRPPVFE
CCQDIGPSPLKEFCFKVMLEIEELPNESFEFYGELQARKKDAAETAADAALWYLENEGYT
WGRNRDK
NT seq 4884 nt   +upstreamnt  +downstreamnt
atggacgccggcgattccttctccgctgaggtgaacgggatatcggagcggcttatgtct
ctaccgatcgacggcgacgaggaacaacagattccagtgaagtcggagaaagacccgaga
aagatcgctaggaagtaccagttagacctctgtaaaaaggcattggaggagaatgtagta
atatatctggaaacaggttgtgggaaaactcatattgcggttctacttatatatgagatg
ggacaccttattaagaaacctcagaagaacatatgcatttttcttgctcctacagttgct
ttggttcagcagcaagcaaaggtcattgcaaattctattgacttcaaagttgggatctat
tgtggaagctcagctcaggtaaagagtccccattactggaagaaggaagttgaggagaat
gaggtcctagttatgaccccacagatacttctgcacaatttgtctcactgctttatcaag
attgaggtgattgctcttctaatatttgatgagtgccattatgcgcaacttgatagcaat
catccttattctgaaattatgaagatcttctacaaaacagatgtcgtgaaacttcctcgt
atttgtggcatgactgcatctccaaaatcaggaaaaggtggctcaatagatggtcttgag
gcattgctgcgagcaaaggtttatactgttgaagacaaggatgagctggaaaaatttgtc
acatcccccaaagtgaatgtgtattattatagttcggaggatggcatgtctttgcctcac
attatttacgctaggaaacttgaggagataaagaatcagtctatgtcagcacttcgaata
aattcacttgatcagagtactctgatgagcaccaaaaagcagcttcaaaagctgcattgc
aatttgatcttttgtctagaaaaccttggactttggggagcattacaggccagccatatt
ttcctgaagggtgatcattttgagaacaccgaggttgtggaagaagagagttcaagtgaa
agtaacttgtgcaataaatatttgcatcaggttgtatcagttcttgcttctgattgcact
ggagatggtaaggaagctgatctgtccactgttgaagttttgaaagagccttacttctca
aaaaagctcttacggcttattggaatattatccagctttaggttgcagcccaatatgaaa
tgcattatatttgttaatagaattgttactgcaagatccctctcacatattcttcgaaac
ttgaagttcttatcagcttggaagtgtggtttccttgtgggagtgcacgttggacttgta
tcacgtaaaaacacaaatatcattcttgataagttccgatctggagagctaaatctatta
gttgcaacaaaagtgggcgaagagggacttgatatacagacatgttgccttgtaatacgt
tttgatcttccagaaacagttgcaagttttatccagtctagaggtcgtgcacgtatgccc
cagtctgaatatgcatttttggtggacaggggcaacctgaaggaactcgggttgatcgaa
cactttaaaaaggatgaagcactgatgaatgaagaaatttcattgagaaaatctagtaat
ctgataactagttttgaagagagaacctataaagtggatactactggggcaacgattagt
tctataatgagcatctcattgctgcaccactattgttcaaaactgcctcatgatgagtac
tttcaaccaaaaccccagtttttctactttgatgatatagatggaatggtttgcaccata
attctcccagccaatgctccaattcatcaaattgtaagttcacctcaatcttccacggat
gcagctaagaaagatgcctgtttgagagcatgcaaggctctacatgaaattggagcactg
actgattacctcttgcctgagcaagatgataaacatgaggaattgactgaagacttatct
gattctggtggcagcagtgaagaggattcacgagccgaattacatgagatgcttgttcca
gctgcccttaggaaaccatggacagaacctcagagctcaacttgctttagttgttactac
attgatatttgtcctaccccagcagatagagattacagaaggtttggtcttttcatgaag
gatcccctcccagaaggggctggacaaatgaaggttgaactttgtttggctcgtggtaga
atggtgaggtcacagcttattccatacggagttactagatttcataaagatgagattgcc
gcagctgaaatggtgcagaaaatgtttctccaaattattcttgacaggcataaatttgtg
tctgaatatgtgtcactaaaaaatgatgatgtctataactcaagctcggcaacattctac
ctattgcttcctcttgaaccgataaaacatggcagcatctctgtggactgggcactaatt
aagagatgtttgtcatctccaattttcaaactttcacgtcttgatgtgggtgatcaaact
tctcaaagtagcaagtacttgcatctttccaatggtcactttagctcagacgatgttgtg
aatagtttggtgtatgtcccatgcaatcgtaaatttttctttatttctgctgtttactgg
gagaagaatggatatagcttacatggtgcatcaaaggaccatgtgcagcactataaggag
aagtttgatattcatcttgcataccccgatcaacctgttttgaaagccaaacaacttttt
ctcttggagaatttattgagaaagaaaaaacttacagaagaatggcgagaaaaggaggaa
cactcttttgaattgcctcctgagatttgtcagttgaaagttattggtttctctaaagat
attgggagttcattgtctctgttaccatcaatcatgcaccggcttgaaagcttacttgtg
gccattgagttgaaggaaaaattagctgaatctttcccagagggagctgaagttaccact
gctcgtgttcttgaagcactcacaacagagaaatgctctgaaagcttttctcttgaaaga
cttgaagtgcttggagatgcatttcttaagtttgcggttggcagatgtctattccttaag
catgatgctttagatgaagggcaactaactagaagacgttccaacatcgtgaacaattct
aatctactcaagcttgcaacggcgaagaagttacaggtctacattcgagatcaatcattt
gagcccgacaaattctatgcatttggtcgtccgtgccctttaaattgcacaaaggaaact
caggagcacattcactcagattatagcaagaacaatgacaaaaattctggagttagatgc
aacaaatgtcatcactggttatacaacaagacaattgctgatgctcttgaggcacttaca
ggagcttttatagtagatagtgggtttaaatcagcaactgcatttcttaagtgggttggt
gtagaagtagattttactctcccaaaaattgataatatctgctctgccagtgagtcattt
cttcctctttcgagtgagattgatgttaaagcccttgaaaatctggtaggttacaaattt
tcccataagggtttgctcattcaggcatttgttcatccatctttcaacaatcttttggga
ggttgctaccagagacttgagttccttggagatgccgtcttggattatttgatcacttcc
tatctgtattctgtctatccaagcttaaaacctggccatttaacagatttgagatcagca
tgcgtgaacaacacttcatttgctgatgtagctggaaaatggtcctttcacaaatatatg
atttgtgattctagtgttctccgagaagcaatagacaaatacgttaacactggtaaatca
ggaacggagaaagagcatatagaagagaaagcatgtccaaaggcccttggcgacttagtg
gagtcttttacaggtgccctatttcttgacacagggttcaatttggaactcgtctggaag
acgatgctcttcttgctggaccctattgttagtatttcgaagctggaatgcaatcctctg
agagaaatttatgaactttcccaatcctataactgggacctgcagttttcttcatcaaag
aaagacaacaaatttagagttgaagctaaagtggatgataaaaatgtttctgcctcagct
ttggctatcaacatcagtggaaaagctgccaaaagagtggctgcaagacagttatttgaa
tctttgaaggctcaaggttacaagacaaagtcaccatcactgaaggaagttcttacgaag
agtgaggtgagggcagccaaattgattggatatgatgagacaccctctactggaactgct
aaatctggtggcgtagaagattttggtagtgatgatgttgcacaagattatgaagttagg
aatatatcaactctgaagcccaagcccatttccagacctatagagcttctttcgcattgc
aagtctccagaagtctgtgttacacaacccccaagcagtagtttccgaagtgatctccct
gctgccaaactaagtaatggctcaaactcgaatggaaaaggtgctcccaccaatgtatgt
gcaaaatcacgtctatatgaattatgtactgctaactgctggagaccacctgtctttgag
tgctgccaagacatcggaccaagtcccttgaaggaattctgtttcaaggtcatgttggaa
atcgaagagttgccaaatgagtcattcgagttctatggggaactccaggccaggaagaag
gatgcggccgagacagcagcagatgctgcactgtggtacttggaaaatgaagggtataca
tggggtagaaatcgtgacaagtga

DBGET integrated database retrieval system