Salvia splendens (scarlet sage): 121752108
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Entry
121752108 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121752108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121752108
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121752108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Spc7
Ezh2_MCSS
Motif
Other DBs
NCBI-GeneID:
121752108
NCBI-ProteinID:
XP_042002938
LinkDB
All DBs
Position
10:complement(8199613..8210325)
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AA seq
810 aa
AA seq
DB search
MRFSFDITERQSPAPSPSSSTPKSELEWFPLQNHPLFSSATATPAVALDTSGRKPPNLMA
WDGASRLYIWDLKKKCLHRLSIRLGEPDPSSILAASPSKVLQAETPVSFEVSKISINKNG
SALLLAGTEGLCVMYLYGRSSLAENTIICRTASLGSEIYFQRNNFIRILQICWHPYSDTH
LGILSSDSVFRIFDLSTDIGQPEQEYYLQPVECGSSRNAAAICPVDFSFGGEHLWDKFSV
FILFSDGSTYIICPVVPLASLYKWESVLELYNDAHTFGLKSADSKAVSNSNMSISWLEAT
FPELVHQDGGGGQLHIVRAQPFVHMDASVSLQGPLHNMCDGVTEDSDVQKGTCEGRAVSF
HYNLVGKDTILVIARSDGQLQLDALADEIQPVWTMGSAPRLCFTSSDKIAGVAMICESFL
SSPTVLKLDQSPYSTAWLGQPPPLLRLAIVDLALPIESSSLIGMISDPLLPERTFCIHAG
GIDSIVLHFLPFTNHTTGKEEPIRTPSVNSVLSTCPGDSSSPSPLHGFLALSDSYGSSWI
VGLTSSNDCIVLQMETWNVLLTDAFDKTQETLTTKETSTKQTGSNTIISKELLSGPKAVL
FPPSAPNLRSVTADSIEGRSTLHQYFKLFHENYVQYAHKVHFELQHHAPQLKKLIDGEHS
RLHKMQQKLLEVETKQEKLEDRVDRAVKIHSSLEERLQSLRSLPGLQKNPLSKAEREFKM
ELDKFTGLELDALHSSIEALSARTKKYTHSLQADSPTQRTQRLVRRGNRVPDDGVSELKS
LLEKLSLINSENSKKVKLVESALKTREITD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttctccttcgacataacggagcgtcaatctccggctccttcgccgtcgagttcg
acgcccaagtcagagctcgaatggtttccactgcagaaccacccgctcttctcctccgcc
actgctacccccgccgtcgctctcgatacctccggaagaaagcctcccaatctcatggcc
tgggatggagcttctcggctatacatttgggacttaaagaagaaatgcctccaccggcta
tcaattcgcttgggcgagcccgacccctcttccatcctcgctgcttcgccctctaaggtg
ttgcaagcggaaacaccagtcagttttgaggtgagtaagatttctatcaacaaaaatggc
tcagctttgctcctggccgggacggagggcctatgtgttatgtacctttatggacgctct
tcactagcagaaaataccatcatctgtcggaccgcttctcttggttcagagatttacttc
cagagaaacaacttcatacgcattctacagatttgctggcacccatacagtgatacacac
ttgggaatcctgtcgtctgattctgttttcagaatttttgatttgtctacagatattggg
cagccagagcaggaatattatttacaaccggtagagtgtgggagtagccgtaatgctgca
gcaatttgtccagttgatttctcttttggtggcgaacatttatgggataaattcagtgtt
tttatcttgtttagtgatggatccacttacataatttgccctgttgttcctttagcaagc
ttgtataaatgggaatctgttttggagctttataatgacgctcatacatttgggctaaaa
tcagccgattcaaaagctgttagtaattcaaatatgtcaatctcatggctggaggcaaca
tttcctgagttagttcatcaagatggaggtggtggacagttgcatattgttagagctcag
ccttttgtccatatggatgcatcagtttcattgcaggggcctctgcataacatgtgtgat
ggtgtgactgaagattctgatgttcagaaaggcacatgtgaagggcgtgcggtcagtttt
cattacaatttagttggcaaagacacaattcttgtgattgctcgtagtgatggccaattg
caactggatgctttggctgatgaaattcagccagtttggacgatgggtagtgcacctcgt
ctttgtttcacttcatctgataagatagctggtgttgctatgatatgtgagtctttcttg
agtagtcctactgttttgaagctagatcagagcccgtattctactgcttggttgggccag
ccacctcctttgctaaggttagccattgtggatttagctttgcctatcgaaagtagttct
ctgattggcatgattagtgatcctctcttacctgaaagaacattttgtattcatgctgga
gggatagattcaattgtcttgcattttctccccttcactaaccacacaactgggaaggaa
gagccaattagaactccatctgtgaattctgtacttagtacatgccctggcgactcatcc
tccccatcacctcttcatggtttcctggctttatcagattcttatgggagttcgtggatt
gtgggacttacttcttctaatgactgtatagtgctacagatggaaacttggaatgtattg
cttactgatgcttttgataagacccaagaaactttaaccacaaaagagacaagtacaaaa
caaacaggttctaacacaataataagcaaagagcttctcagtgggccaaaggcagttcta
tttcccccttctgcaccaaatttgcgctctgtaacagctgattctattgaaggacgatcc
acgcttcatcaatatttcaagctgtttcatgaaaattatgtgcagtatgcacacaaggtg
cactttgagctccagcatcatgcgcctcagttgaaaaaattaatagacggagagcattct
cggttgcacaagatgcaacagaagctcttggaagttgaaacaaaacaggaaaaattagag
gatcgtgtagatcgtgcagttaagattcacagttccttagaggaacggctacaaagcttg
aggagcctgcccggactgcagaaaaacccactttctaaagcggagagagaattcaagatg
gaactagataaatttaccgggttggagttggatgcattacactcttccattgaagctctg
agtgcaagaacgaaaaaatacactcattccttgcaggctgattccccaactcaacgaaca
caaaggctggtaagaaggggaaatagggttccagatgatggcgtgtctgaactcaaatct
ttacttgaaaaactctcgctgataaacagcgagaacagcaaaaaggtgaaactcgttgaa
tccgcattgaaaaccagggaaatcacagattga
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