Salvia splendens (scarlet sage): 121752192
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Entry
121752192 CDS
T07627
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121752192
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121752192
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
121752192
NCBI-ProteinID:
XP_042003064
LinkDB
All DBs
Position
10:12922738..12941749
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AA seq
1968 aa
AA seq
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MWTNIFKIGGLHWISWFQFLPNEFDFSALPDKSVKVDPKDAAMSAVLSAHLQLQKEGFLS
AWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGQHSSINEKAQHAVATLRVLASGFWVSPGD
SEEVASAISQALRNCIERALRGFSYVRFGDVFSKYQPFTQNEELFRRGQPVAEFIFAATE
ETIFVHVIISAKHVRALSNGDIEPFLSSSSRRTNDQIPVVVSPHGMHGKLTGCCPGDLVK
QVFLSSGKFRDPNGTSGLPFKVARGSGLPTQQRGQNCFVEVSIGCQEKLARDNVILHSNF
SQPHGTESPASRLCNQRWPLDKLPISEKKFVYPTEAVLVPVMQTSFARSSLKRFWLQNWA
GPSLSASSLVMHCFDFGSDDKVDSMDGSSLEPSGTRSYHGYRSSSNSNSSSYGSMSSSSS
DSDRKVLGARDLEADADSLMSRQSGLSSLGQMQNDVLQLGSKRPRSGTSESFGQAGMVLN
PSMTDYGTMEANMSINGATNENVGSQWGWDDDDRGMGMDIQALLSEFGDFGDFFENDALP
LGEPPGTAESQVLMFPAPDGGELCSSPSTSVMDVPDRMLVSTSFPTFDNFNQLNAPDSVE
DSVIKNQETTKSSAPSQVTCMLPSSNIEFDHVVKAEALMSFAPEYGGVEAPNSEISSVIF
RSPYIPRSCKVDSASSSSHYVYSATPPSPCCNGSHEKSTLPSEKACAEKKELCSAIKSKK
YYTHVERGKQQTGASHNSLGKGEVGGSSAQFFALSQADVKPVSAKASDSSQKGDNCLPSA
RTVLATEIECLVCQVSMCRLRHTLLSSSNISASSLSGLSCSTQNLGHNDSSTMVDNMSCK
SELKKKETIPVRIAGDVDGGMLDGSLTAPVGVWRSVGIPKVSKPSSSNMEVCPSIPHNSF
MEESMLSYGLRQPLQELLDGIAFLVQQATSLVDVALDADCGDGPYGWLALQEQRRRGFSC
GPSMVHAGCGGLLASSHSLDIAGMELVDPLSVDVQASLTIGLLQSDIKEALKSAFSNADG
PLSVMDWCRGRNPSNESAMTYDGHSAESIASASECRDSSSTVTLSVGDPMSPSLTSAGGA
SGLKGDGTRGDDGGTSLMESDQQHCSRIRPTLSVVPFPSILVGYQDDWLKTSAGSLQLWE
KAPLEPYATVKHMSYYVVCPNIDPLTTAATDFFLQLGTVYETCKLGTHAPQSLGNEMDID
SKKISPGFALLDCPQSMKIDTYNASMLGSISDYFLFLSNGWDLTSYLKTLSKVLKTLKFG
SPAPVNSKEGNGGPCTVVYVVCPFPEPLAVLQTVVEASIAIGSVIRSSDKERRSMMHNQV
AKALSYPASVDESFSNVLTLTGFSIPKLVLQIVTVDAIFRVTSPKLNELIILKEIAFTVY
NKARRISRGASGEAMSSLSVPGGSHSVLMQMSPSVPGMWKDCVGSRIGGPPLQRENELDT
SLRQGAWDNSWQTARSGGLGADPSRTGDIFPLDDIRCLFEPLFILAEPGSIERGLSPFFG
NSADSSKLSDDCTSTSFVQNSTSSGTGDNGPVSQHDSLDSDGLTSGHQKSIPSLHCCYGW
TEDWRWMVCIWTDSRGELLDSCVYPFGGISSRQDTKGLQSLFVQILQQGCQILQACSPDA
GVAKPRDLVITRIGCFFELECQEWQKALYAAGGSEVKKWSLQLRRSLPDGMPAGNNGNSL
QQQEMGLMQERALPSSPSTLYGPHSKSSSFMKGGIAQPSSRKQLMGGHAVLDNSKGLLQW
VQSVSFVSVSIDHSLQLVLQADSSPGSSQGSATSGLSGYLEGYTPVKSLGSTSASYLLVP
SPSMRFLPPSVLQLPTCLTADSPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRRDARSLSK
EEWPSVLSVSLIDYCGGNVVSQEKSGKGANKPVGRGVSSESKDIEVETHIILDTIAAELH
ALSWMTASPAYLERRSALPFHCDMVLRLRRLLHFADKERSRLPEKAPT
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatatattcaaaatcggaggtttgcattggatatcatggtttcagtttctt
cccaatgaatttgatttcagcgctctacctgataagagtgtgaaggtggaccctaaagat
gcagcgatgtcggcagtgctctcagcacatctgcagctgcagaaggaagggtttctcagc
gcatggactaactctttcgttggaccttgggatccttctcagggtctgcataatcctgat
gagaagattaagctttggctttttctccctggtcaacactcctctatcaatgagaaggca
caacatgctgttgccacattgagagtgctcgcatctggattctgggtgtctcctggcgat
tccgaagaagttgcttctgccatatcacaggctttaagaaactgtattgaaagagcactt
agagggttttcatatgtacgatttggagatgtgttctccaagtatcagccatttactcag
aatgaagaactattcaggaggggtcaacctgtcgctgagttcatctttgctgcaacagaa
gaaacaatatttgttcatgttattatatctgctaagcatgtcagagctctttcaaatggc
gacattgaacctttcctcagcagttctagccggcgtaccaatgaccaaattccagttgtt
gtttctcctcatggaatgcatgggaagcttacgggatgttgtcctggtgatcttgtaaag
caagtgtttctgagctccggaaagtttagagatccaaatggaacttcaggtctccctttc
aaagttgctcgaggatctggactgccaactcaacaaaggggacaaaattgctttgttgaa
gtgtccattggttgtcaagaaaagttggcgcgggataatgtgatcttgcatagtaacttt
tctcagcctcatggcactgagtctccagcttctagactatgtaatcagaggtggccttta
gacaagcttccaatctctgaaaaaaagtttgtctatccaacagaggctgttcttgttcca
gttatgcagacatcttttgcaagatcatctttgaaaagattctggctgcaaaattgggct
ggaccgtctttgtcggcttcatcacttgttatgcattgttttgattttggcagtgatgac
aaagttgattcaatggatggatcttctctcgaaccaagtggaactcgttcttaccatggg
tatcgtagtagtagtaacagtaatagtagtagctatggcagcatgagtagttcctccagt
gacagtgatcgcaaggtcctgggagctcgtgatcttgaggcagatgcagattctttaatg
tccagacagtctggtttatcttccttgggtcagatgcagaatgatgtccttcaattgggt
tctaaaaggccacgaagtgggacttcagagtcatttggtcaagcaggcatggttttgaat
ccttccatgactgattatggtaccatggaagccaatatgtctattaatggggctacaaat
gaaaatgttggatctcagtggggatgggacgatgatgatagaggcatggggatggatatt
caagcactactatcagagtttggcgattttggtgacttttttgagaatgatgctttgccg
ctcggggagcctccagggaccgctgagtctcaagttctcatgtttcctgcacctgatggt
ggtgagttgtgtagcagccccagcacctcagtgatggatgtgccagatcgaatgcttgta
tcgacaagttttccaacctttgataacttcaaccaactaaatgctcctgattctgtggaa
gattcagtcatcaaaaaccaagaaaccacaaagagttctgctcccagtcaagttacttgt
atgctgccatcttccaatattgagtttgatcacgtcgtaaaggctgaagcactgatgtca
tttgccccagaatatgggggtgtggaagcccctaacagtgagatctcctctgtgattttc
cgaagcccctacattcctagatcttgcaaagtggattctgcatcaagctcaagtcattat
gtgtactctgcaacacctccttccccttgctgtaatggatctcatgagaagtccaccttg
ccaagtgagaaagcttgtgcagaaaagaaagaattgtgttctgcgattaaatcaaaaaaa
tactacacacatgttgaaagaggaaagcagcaaactggtgcaagtcataatagtcttggt
aaaggtgaagttggaggttcatcagcacagttttttgctttgagccaagcagatgtcaaa
cctgtctcagctaaagcaagtgacagctcacaaaaaggagataattgtctcccatcagct
aggactgtccttgcaacagagattgaatgcctagtgtgccaggtttccatgtgtaggctg
cgacatacactgctttcttccagcaacatttcagcttctagtctgagtggattatcttgc
agcactcaaaatctaggtcataatgattcaagcaccatggtggacaatatgtcatgcaaa
tctgagttgaaaaagaaagaaacaattcctgttaggatagctggtgatgtagatggggga
atgctagatgggtctttgactgcaccagttggggtttggcgttctgttggaattcctaaa
gtttctaagccaagttcatcaaatatggaggtctgcccatccattccacataattcattc
atggaagaaagtatgctttcatacggactacggcagccactccaggaacttcttgatggt
atcgcattccttgttcagcaagcaacttcattagttgatgtggctctggatgctgattgt
ggtgatggtccatatgggtggcttgcacttcaagagcagaggaggcgtggattttcatgt
ggaccctctatggtacatgctggctgtgggggtcttttggcctcttcccattccctggac
attgctggaatggagcttgttgatccactctcagttgatgtccaggcatctttaacaatt
ggtttgcttcagtctgacataaaagaagcgttgaaatctgcatttagcaatgcagatggc
cctctttctgttatggattggtgtaggggccgtaacccatccaatgaatcggcgatgact
tatgatggacactctgcggagtctattgctagtgcaagtgaatgccgagattcttctagt
acagtaactttatctgttggagatcccatgagcccatctctgacctctgctggtggagca
tctgggctcaaaggtgatggaaccagaggggatgatggaggtacttctctgatggagtca
gatcagcaacactgctcacggatacggcctacactatctgttgttccatttccatcaata
cttgttgggtaccaagatgattggctcaaaacctcagccggttccttgcaactctgggaa
aaggctcctctggaaccttatgcaactgtgaaacatatgagctattatgtggtatgccca
aatattgatccacttacaacagctgctactgatttttttcttcagcttggaactgtttat
gaaacctgcaagctgggaacacatgcaccccaaagtctgggaaatgagatggatatagat
tccaagaaaatatcacccggttttgctctccttgattgccctcaatcaatgaagatagat
acctacaatgcatctatgttgggatcaatcagtgattatttccttttcctatcaaatggc
tgggacctgactagttatttaaagactctttctaaggttcttaagaccttgaaattcggt
tctcctgcgccagtgaattccaaggaaggaaatggcggaccatgcactgtagtttatgtg
gtctgccccttcccagagcctcttgcagtcctacagactgtggttgaagcttctattgct
atcggatcagtgattcgatcttctgataaagaaaggcgatccatgatgcacaatcaagtt
gcaaaagctttgagttacccagcttctgtagatgaatcattttcaaatgttttgactctt
acaggatttagcatcccaaagcttgtattgcagattgtgactgtagatgccatatttagg
gttactagccccaagctaaatgagctgatcattctaaaggaaattgctttcactgtttac
aataaggctcgacgaatttcacgaggagcatctggtgaggcaatgtcatcattatctgtg
ccagggggttctcattcagtcttgatgcaaatgtctccatcggttcctggtatgtggaag
gattgtgttggttctcgaattggaggacctcctcttcagagagagaatgaacttgataca
agcttgagacagggtgcttgggacaactcttggcagacagcaaggagtggggggcttgga
gcagatcccagcagaactggagatatctttcctctggatgatattcgttgtttgtttgaa
ccactttttattcttgcagaacctggctccatcgagcgtgggctttcaccctttttcggt
aattcggcagattcatcaaagctgtcagatgattgcacaagtactagctttgtgcaaaat
tctacttcttcaggaactggagataatgggcctgtttctcagcatgattccttggattca
gatggtttgacatctggccaccaaaaatcaatcccaagtctgcattgttgttatggatgg
actgaggattggcgctggatggtgtgcatatggacagattcaaggggagaattgcttgac
agttgtgtttacccctttggaggaatcagtagtcggcaagacacaaagggtctgcagtcc
ctttttgtccaaatactacaacaaggatgccagattcttcaagcttgttctcctgatgct
ggtgtagctaagcctagagatctcgtgattacacgaattggatgcttttttgagctcgag
tgccaggagtggcagaaagctttatatgcagctgggggttctgaggtgaaaaagtggtct
ctgcagctccgtcgttcccttcctgatggaatgccagctggcaacaatggaaattcttta
caacagcaggagatgggtttaatgcaagagagggcacttccttcttcacctagtacattg
tacggtcctcattctaaatcttcctcattcatgaaaggtggcattgcacaaccttcctcg
aggaagcagctaatgggtgggcatgcagtgttagacaattcgaaaggcttactgcaatgg
gtgcagagcgtcagtttcgtctcagtctcgattgatcactcattacaactggtgttacaa
gcagattcatctcctgggtcaagtcaaggtagtgccacgtcaggtctgtctggctatctt
gaaggatacacacctgtgaagtcccttgggtctacatcagcttcctaccttttagtccct
tcaccgagcatgcgctttctgcctccttctgttcttcagctccctacgtgtctcactgca
gattccccgcctctcgctcatcttctacatagcaaagggtctgcaattcccctgtccacg
ggttttgtcgtttcaaaagcagtaccttcaatgaggagagatgccaggagtttatcaaaa
gaagaatggccttcagttctctctgttagtttaattgactattgtggaggtaacgttgtc
agccaagagaagtcagggaagggtgccaataagcctgtggggcgaggtgtgagctctgaa
tccaaagatatcgaggtggaaacacacatcattctagatacaatagcagcagaactccat
gctttgtcctggatgactgctagcccagcatacttggagagaagatctgctttgcctttc
cattgtgacatggttctgagactcagaaggcttctccatttcgcagataaggaacgctcc
cggcttccagagaaggcaccgacatga
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