Salvia splendens (scarlet sage): 121752193
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Entry
121752193 CDS
T07627
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121752193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121752193
03036 Chromosome and associated proteins [BR:
sspl03036
]
121752193
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121752193
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121752193
PBAF complex
121752193
GBAF(ncBAF) complex
121752193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
FAA_hydro_N_2
Motif
Other DBs
NCBI-GeneID:
121752193
NCBI-ProteinID:
XP_042003068
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All DBs
Position
10:13259378..13264923
Genome browser
AA seq
927 aa
AA seq
DB search
MDEKRRDSAANSSPTVSAMEASPSEQPTSRRRGGQKRKSAPINNSGGSSASQTASSKRQA
REKPPAVPFPPIHMIGPCTRARVQPYNSSSLSEAALLKSEVEAREAAAARADEMSRLTEN
WEAMEAKIEAEYEAIRSRDASAHVVPIHAGWFSWTKIHPLEERMLPSFFNGKSESRTQEI
YMEIRNWIMKKFHLDPDAKVELKHLSELTVGEPDARQEVMEFLDYWGLINYHPFPDREPA
AINVDVDANKDESGKIESLVEKLFKFEAVQSWNPIVTRMNMNSPSFSSGLLPETVVTDEL
VKSEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSDMSPLDFILMEPPD
ASGASGGKWTDQETLLLLEAIELFRDNWSEIAEHVATKTKAQCILHFVQMPIEDTFFNHD
DENNDVPKENGAPDSIGNKDSTPEADKDSDAAPKDESQGGSTDNQDSSCPMVISKVNEVK
ESEASPEAGESFALKALKEAFEAVCSFPSPGDKLCLAEAGNPVMTLAAFLVRLVDPNIAN
ASVCSLLKSLSNGYSSEQLAARHCIPLEDPPNDKKSTADAEEISTKAPEQEPQKDKDEND
EKLEENPNPVVSPDDGNDGNKDPAPEENNGGKDNSSKDRNDAASPKPDSTDRSDTVKEPD
VVAMEEDAKPNSQSAPGSSDLPNETDAEEPAVSTSQTELQSSSATEAEGVAVDLSHSKEP
IKEEDMGPVSGNKEADALVISNSTEKDNITGDREADGSGNEKKNSEATKKYLDSDEKLKR
AAVTALSAGAVKAKLLADQEEDQILQLSTFLIEKQLYKLETKLAFFADMENVGLRVRELL
DRSKQRLLQERAQIIATRFGMPPGSARLASQNLPPNRASAAFPNAASRTLMGMNSLRPPV
SRPVMPPNPTSSTMLTGNATGSSVGME
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaagcgaagagactccgccgcgaattcgtctccgacggtgtcggcgatggag
gcttcaccgtcggagcagccgacttctcggcggagaggcggccagaagaggaaatcggcc
cccatcaacaacagcggcggaagctcggcttctcaaacggcttcttcgaagagacaggcg
agggagaagcctccggcggttccgttccctccgatccacatgattgggccgtgcactagg
gcgcgcgtgcagccgtacaatagcagcagcttgtctgaggcggctttgctgaagagcgag
gtggaggctcgggaggcggcggcggcaagggctgatgagatgagtagactgaccgagaat
tgggaggcaatggaggcgaagattgaggctgagtatgaagcgattagatcgagagatgcg
agtgctcacgtggtgcctattcatgccggttggttttcatggacaaaaatccatccactg
gaagagagaatgctgccttcattcttcaatgggaaatcagaaagtaggactcaggaaata
tatatggagatacgcaattggataatgaaaaagttccacctggatcctgatgcaaaagtt
gagctgaagcatctgtctgaacttactgttggagaacctgatgctaggcaagaggtgatg
gagtttctggattactggggattgattaattaccatcctttcccagaccgggagcctgct
gctattaatgttgatgtggatgctaacaaggatgaatctgggaaaattgaatcattggtt
gaaaaactctttaaatttgaagcggtgcaatcatggaatccaattgttaccaggatgaac
atgaacagtccatccttttcgtctggtttgcttccagaaactgttgtcactgatgaacta
gtgaagtctgaaggcccttctgtcgagtaccattgtaactcttgttcagcggattgttca
cggaagcgatatcactgccagaagcaggcagattttgatctctgtgctgagtgttataac
aatgggaagtttgggtcagatatgtccccactagatttcattcttatggaaccaccagat
gctagtggtgctagtggagggaaatggacagatcaagaaactcttcttctgcttgaagct
atagaattatttagagataattggagcgagattgctgagcatgttgcaacgaagacaaaa
gctcagtgtatcttgcactttgttcaaatgccaattgaagatacctttttcaatcacgat
gatgaaaacaatgacgttcctaaggaaaatggggcaccagattccatcggtaataaggac
tccacacctgaagctgacaaagatagtgatgctgctcctaaagatgagagccaaggtggg
agtaccgacaatcaggactcatcctgtccaatggttatctcaaaggttaatgaggtcaag
gaatcagaagcgagtcctgaagctggagagagctttgcattgaaagctctcaaggaagca
tttgaagccgtgtgttcttttccttcacctggagataaattatgcttagctgaagctggt
aaccctgtgatgacattggctgcatttctagtacgactggtggaccctaacattgccaat
gcatcagtttgtagcctattgaaatctctctctaacggttattccagtgagcagcttgct
gccaggcactgcatccctctggaagatcctccaaatgacaagaagagtacggctgatgcc
gaagaaatttctactaaagcaccagagcaagaacctcagaaggataaggatgaaaatgat
gaaaaactagaggaaaatcctaatccagttgtttcacctgatgatggaaatgatggcaac
aaggatcctgctcctgaagaaaataatggaggaaaggataattcttctaaggaccggaat
gatgcagcttctcccaaacctgacagtacagacagatctgatactgttaaggaacctgat
gtagtggctatggaggaggatgcaaaaccaaactcacagagtgcccctggtagctctgat
ttgccaaatgaaacagatgctgaagaaccagcagtctcaacatctcaaactgagcttcaa
tcaagttctgccacagaagcagaaggtgtagctgtggatctctctcactctaaagagcct
attaaagaagaagatatgggacctgtttctggaaataaagaggctgatgcattggttatc
tccaattcaactgaaaaagacaacattacaggtgatagagaagctgatggaagtggtaat
gaaaagaaaaattctgaagcgacaaaaaaatatcttgattctgatgagaagctaaaacga
gctgcagtgactgccctatcagctggagcagtgaaagcaaaacttcttgccgatcaagaa
gaagatcaaatacttcagctttccacatttctaatagaaaagcagttgtacaagctagag
accaagttggctttctttgctgatatggaaaacgtaggactgagggttagggaactgttg
gatcggtcgaaacagaggctcttacaagagagagcacagataatcgcgacacgatttggg
atgccaccgggatcagctcgtctagcttcacagaatctacctcccaacagggcatcagct
gctttccccaatgcggcctctagaaccttaatgggcatgaactcccttcggccaccagtt
tcaagaccagtgatgccaccgaatcctacttcaagcactatgttgactggaaatgccaca
ggaagttcagttggcatggagtag
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