Salvia splendens (scarlet sage): 121752248
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Entry
121752248 CDS
T07627
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00061
Fatty acid biosynthesis
sspl00071
Fatty acid degradation
sspl01100
Metabolic pathways
sspl01212
Fatty acid metabolism
sspl04146
Peroxisome
Module
sspl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121752248
00071 Fatty acid degradation
121752248
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121752248
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sspl01004
]
121752248
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121752248
Enzymes [BR:
sspl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121752248
Lipid biosynthesis proteins [BR:
sspl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121752248
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of breast milk
121752248
Exosomal proteins of breast cancer cells
121752248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
121752248
NCBI-ProteinID:
XP_042003155
LinkDB
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Position
10:complement(12774324..12778544)
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AA seq
659 aa
AA seq
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MEDYVMKVEEGRPAADGKPSAGLAYRCIYAKDGLMEIPPALISPWDFFSESVKKFPKNPM
LGRRLLKDGMAGGYSWLTYQQVYDTTIAIGSAMRRRGVNPGDKCGIYGVNCPEWIMAMEA
CNSQAITYVPLYDSLGANAVEFIINHAEVSIAFVHESKFPAILSCLSKCASNLKTIVSFG
KVSDKQKEAAEELGVTCFSWEEFALLGDSDGDLPPKKKTDTLTIMYTSGTTGEPKGVILS
NGAFMSEVLSMDQLLRETDKAGTEEDVYFSFLPLAHIFDQIIETYCIYSGSSIGFWQGDI
RFLIEDLVVLKPTIFCGVPRVFDRIYTGIMDKISAGGSLKKSLFQIAYNYKLRNLEKGLK
QEEASPLLDKLVFDKIRQGFGGRVRLILSGAAPLPKHIEEFLRVTCCCVLSQGYGLTESC
GGCFTSIANVFPMIGTVGVPMTTIEARLESVPEMGYDALSVVPRGEICLRGNTLFSGYHK
RQDLTNEVLVDGWFHTGDVGEWQPNGAMKIIDRKKNIFKLSQGEYVAVESLESTYSQCPL
ITSIWVYGNSFESFLVAVVVPERKALEDWAVNSEEKGDFTLLCNNPKARKYILDELNKTA
KQHNLRGFEMLKAVSLEPIPFDIDRDLITPTFKLKRPQLLKHYKDCIDQLYIEAKGTKS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaagattatgtgatgaaggtcgaggaagggcgcccggcggcggacgggaagccgtcg
gcggggctggcctatcgctgcatttacgcaaaggatgggctcatggaaattccacctgca
ctcatttctccatgggattttttcagtgaatccgttaagaagttcccaaaaaacccgatg
ctaggtcgccgtctactcaaggatggaatggcgggtggatacagttggctaacttaccag
caagtctatgatacaactattgccattggttctgctatgcgacgccgtggcgtcaaccct
ggcgacaaatgcggtatatatggggttaactgtcctgagtggatcatggcaatggaggcg
tgtaatagtcaggctatcacatatgtaccactatatgattcactcggtgcaaatgcagtg
gagttcattatcaaccatgctgaagtctccattgcttttgtccatgaaagcaaatttcct
gctatactttcatgtctctccaaatgtgcctcaaatctaaaaactattgtcagcttcgga
aaggtttctgataagcagaaggaggcagctgaagagctaggtgtcacttgcttctcatgg
gaagagtttgctctattgggtgattcagacggcgatcttcctcctaagaagaagacagat
acattgacgataatgtacaccagtggcacgacaggggagccaaagggggtcattctatca
aatggtgcttttatgtctgaagtcttgtctatggatcaactcctcagagagacagacaaa
gctggtactgaagaggatgtgtacttttccttccttcctctagctcatatattcgatcaa
atcattgagacctattgtatctactcgggctcatccattgggttttggcaaggggatatt
cgtttcttgattgaggatcttgtcgtcttaaagccaactatattctgtggtgttcctaga
gtttttgacagaatatacacaggcatcatggataaaatctcagctggtggctcactgaag
aagtcacttttccagattgcatacaactataaactgaggaatctggagaaagggctcaaa
caagaggaagcatctccgcttttggacaagctcgtttttgataagattagacaaggattt
ggtggacgtgttcgtctcattctatcgggagctgcacctttacctaagcacattgaggag
ttcttgagggtgacttgctgctgtgtcttgtcacagggctatggcctcacagaaagttgt
ggagggtgtttcacatctatagccaacgtattccctatgataggcacagtgggggttcct
atgaccacgatcgaggcaagactcgaatctgtgcctgagatgggatatgatgctctctct
gtcgttcccagaggtgaaatttgtcttcggggaaacaccttattctctggctaccataaa
cgccaagatctcacgaatgaggtgctcgttgatggttggttccacacaggtgatgttggt
gaatggcagcctaatggagcgatgaagatcatagacagaaagaagaatatattcaagctg
tcacaaggcgaatatgttgctgtggaaagtctcgaaagcacctactcacaatgccctctc
attacatcgatttgggtgtatggcaacagcttcgagtcgttcctagtggctgtggtggtg
ccggagagaaaggcacttgaagattgggcagtgaatagtgaagagaaaggagatttcacg
ctcctgtgcaataatccgaaagcaagaaaatatattctggacgagctcaacaaaacggcg
aaacaacataatctccgcggctttgaaatgttgaaggccgttagcctagagcctattcct
ttcgacattgatagggacttgatcactccaacgttcaagcttaagaggccacagctgctc
aagcattacaaggactgcattgatcagttgtacattgaagctaaaggtacaaagtcatag
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