Salvia splendens (scarlet sage): 121752357
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Entry
121752357 CDS
T07627
Name
(RefSeq) YTH domain-containing protein ECT3-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121752357
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121752357
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
121752357
NCBI-ProteinID:
XP_042003310
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Position
10:complement(23406636..23412741)
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AA seq
609 aa
AA seq
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MEDGNQPSLDRFAPIQSTGDQAVEKHNLPEQRPSPKGERIVSTNPSPDTAISGASRTTKD
QPATSEPSGTLTAVHPFNAYTPQEQGYYFGGYDNGSGNWDDHSNYVNANNLHVIPPGMYN
DNSSLFFPPSYGFDSQMAYGQFSPLASPMSSIMIDGQLFSPHQMPVTPPYYPPAVSPGPH
HVTSGLPASQFELMPSGNGSQENLIDNAFFGPGSGYYLPFGSFGGGDLSGNSGHGLYNFP
GEFASNEPMPSRSSSLDTSRFMSPLTSGNVYPQPIGILGSYEQNVAQASYQGFGLTVNSS
ARHFPHSGSYQSTLGPNSNRTRFTSDRGGRRERDRDTVNISTDTLGISGDRNRGPRALKP
TSKISPEEGSTDSSKDVESTSRFHVQHFNSPDFITDYEHAKFFVIKSFSEDNIHKSIKYN
VWASTPLGNRKLDAAYNEAKEMEGICPIFLFFSVNASGQFCGVAEMVGSVDFETSADYWQ
QDRWSGQFPVKWHIIKDVPNSRFRHILLENNDNKPVTHSRDSQEVKLEQGIEMLMIFKNH
DADTSLLDDFNFYDEREKALLDRKAKQRATPTGNTMATLATDSINKFSDNLADALQLDGV
KSLSNKDVE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtaatcagccgagcctcgatcgcttcgctcctattcaatctactggtgac
caagctgttgagaaacataatttgcctgaacagcgtccctcgccaaaaggtgaaagaatt
gtttctacaaatccttctccagatactgcaatttcaggtgcctcaagaaccacaaaagat
cagccagcaacttcagaaccaagtggaactcttaccgcagtgcatccattcaatgcgtat
acccctcaagaacaaggttactattttggaggttatgataatggcagtggtaactgggat
gaccattctaactatgttaatgccaacaacttgcatgtcatacctccaggaatgtacaat
gataactcttcactcttcttcccaccaagctatggcttcgactcccagatggcatatgga
cagttttccccacttgctagcccaatgtcttcaataatgattgatggtcagctgttttct
ccacaccaaatgcctgtgactcccccttactatccgccagcagtttcacctggcccacat
catgttacttcgggacttccagcttcacagtttgaattgatgccatcaggaaatggaagc
caagaaaaccttattgacaatgcattttttgggccagggtcaggttattatctaccattt
ggttcttttggtggtggagatctttctgggaatagtggtcatggtctttacaatttccct
ggcgagtttgcttctaacgaaccaatgccaagccgttcgagttccttagatactagcagg
ttcatgtctccattaacttctggaaatgtgtatcctcaacctattggcatacttggatcg
tatgagcaaaatgttgcacaggcatcatatcagggtttcggtttaacagtaaactcctcg
gctaggcattttccccatagtggttcttaccagagcactcttgggcctaattccaaccgg
actcgatttacgagtgacagaggtggaagacgtgaaagggatagagatactgtcaatatc
tctacagacacacttggtatttctggtgatcggaaccgaggacctagggctttgaagccc
acaagcaagatttccccagaagaaggatctactgatagcagtaaagatgttgaatctact
tctagatttcatgtccaacattttaactccccagatttcataaccgattatgaacatgca
aaattctttgtcatcaagtcattcagcgaagacaatatccataaaagtattaaatacaat
gtttgggccagcacaccacttggaaacagaaaattggatgctgcgtataatgaagcaaaa
gaaatggagggcatttgtccaatctttctctttttttctgtcaatgccagtggacagttt
tgtggggtagctgagatggttggatctgttgactttgagaccagtgctgattactggcag
caggatcggtggagtggtcagtttcctgttaaatggcatattatcaaagatgtacccaac
agtcgcttccgtcacatacttcttgagaataatgacaacaagcctgttactcacagtcga
gattcacaagaggtgaagctagaacaaggaattgaaatgttaatgatcttcaagaaccat
gatgctgacacctctcttcttgatgattttaacttctatgatgagcgagagaaagccttg
ctggacaggaaggcaaaacagcgagctactcctactggaaatacgatggctactcttgct
actgattcgataaataaattttcagataacttggctgatgctctccagttagatggcgtt
aaaagcctctcaaacaaagatgtggagtaa
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