Salvia splendens (scarlet sage): 121752421
Help
Entry
121752421 CDS
T07627
Name
(RefSeq) autophagy-related protein 18b-like
KO
K17908
autophagy-related protein 18
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121752421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121752421
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121752421
Membrane trafficking [BR:
sspl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121752421
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121752421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT80_2nd
EIF3I
Ge1_WD40
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
121752421
NCBI-ProteinID:
XP_042003424
LinkDB
All DBs
Position
10:complement(10467966..10473414)
Genome browser
AA seq
359 aa
AA seq
DB search
MANQSSAHPILCASFNQDNSYFAIGTKDGFKIFDCDTGRLLYERAIGAFVIVEMLYRTNL
LAIVGAGEQPSLSPRRLCLFNIVNGTSLRELNFLTSILAVRIDRKRLIVLFKEQAYIYDV
NSLEKKQIIDTVPNVQGLCAFSACVDNPYLALPASTTKGSLLVYNVVDLQSHCEIDAHRS
PLIAMAFSSNGTYIATASEHGTIIRVHLISDATKSYSFRRGTYSSTIFSLSFGPSADLPD
ILLATSSSGSVHIFSLGFDLNERKSNSLLGSIIPGSVSDALHPAHHLVFHHAFSAGVRSN
AVVQKIEKASGSSNPEPVVLRATISMISFSGYYQEYSLRINNKNEATWTLERRFKAIAE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccaatcatctgctcatccgattctctgtgcttccttcaaccaagacaatagc
tactttgcaattggaaccaaagacggcttcaaaatcttcgactgtgataccggaaggctc
ctctatgaacgagctattggtgcattcgtcattgttgaaatgctatacaggacgaatctt
cttgccatagttggggctggtgaacagccttctttgtcaccaaggagattatgtttgttc
aatatcgttaatggaacttcactcagagaactcaacttcttgacttctattcttgctgtt
cgtatagataggaaaagattgatagttttgtttaaagagcaagcctacatctatgatgtt
aacagcttggaaaaaaagcagattattgatacagtgcctaatgtacaaggactttgtgca
ttttctgcttgcgtggataatccctacttagctcttcccgctagtacaacaaaagggtct
ttactagtctacaatgtagtggatctgcagtcacactgtgagatagacgcccatcgctcg
cccctaattgccatggctttttcttcaaatgggacgtacatagctacagcatctgaacac
ggaactataatcagagttcatctaatctctgatgcaactaagtcatacagtttccgtagg
ggtacttattcgtcgacgatcttttctctatcatttgggccttcagctgatcttccagat
attcttcttgctacaagctcttcaggttctgttcacattttctccctgggctttgatctt
aatgaaagaaagtcaaacagccttcttgggtcaataattcctggttctgttagcgatgca
ctgcatcctgctcatcatcttgtattccatcatgctttctcagctggagtcagaagtaat
gctgtagttcagaagatagagaaagccagtggttcatcaaatcccgaacctgttgtgttg
agagccaccatatcaatgattagcttcagtggatactatcaagaatatagtttgagaatt
aacaacaaaaacgaagctacatggaccttggagcgcaggttcaaagctatcgcggaataa
DBGET
integrated database retrieval system