Salvia splendens (scarlet sage): 121752436
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Entry
121752436 CDS
T07627
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121752436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121752436
03036 Chromosome and associated proteins [BR:
sspl03036
]
121752436
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121752436
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121752436
PBAF complex
121752436
GBAF(ncBAF) complex
121752436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
PilJ
Motif
Other DBs
NCBI-GeneID:
121752436
NCBI-ProteinID:
XP_042003442
LinkDB
All DBs
Position
10:complement(11253942..11257331)
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AA seq
539 aa
AA seq
DB search
MNQHNPSSNNNLIRGNISFANAGGVQMQVQRPMQTSMNNNQQQITHQPHVQHAGRPYFAG
HFQLSEGQPQTFVQAQPGQVQAPTQILASPQGNANISISSPPVSTPGSGAAGTGKRLHKP
PSRPSGGSSGQGTASPMKTMELAPAVRRGKRKLPDKVIPEKIAAIIPECALYSQLLEFEA
RVDAALARKKIDIMESLKNPVRLQKVLRIYVFNTFTNQTDISIDKENSEPPSWSLRLIGR
ILEDGKDPIAEGQMEKPKCSYPKLSSFFKKITIYLDQNLYPENHVILWESSRSPALCEGF
EVKRKGDKEFTAIIRLEMNYEPEKFKLSSALQEVLGIDVETRPRIMAALWHYVKMKKLQI
PGEASFFMCDPPLRKVFGEDKLKFSMVPQKITPHLTPPGPIHLEHRVKLSGDGPSGNTCY
DVLVDVPLSLEGKKDFLTSLEQNKSIDSCDESISSALKKIHEHCRRRAFFLGFSQSPAEF
INTLITSQARDLKVASADAGRDLEKERRAEFYDQPWTEDAVIRYLNRKPAVGSEAAGNK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcataatccaagcagcaataacaatctgattagaggaaatataagttttgca
aatgcagggggggttcaaatgcaagtgcaaaggccaatgcaaacatccatgaacaataac
caacaacagataacccatcagcctcatgtgcaacatgcgggaaggccctatttcgcagga
catttccaactatctgaaggtcaacctcagacatttgtccaagcccagcctgggcaagtt
caagctcctacgcaaatcttggcctcgccccagggaaatgctaacattagcatctcatcc
cctcccgtgtccacaccgggttctggtgcagctggaacgggcaagcgcctacataagcct
ccttctcggccttctgggggatcctctggccagggcactgcttctcctatgaaaactatg
gaattggcccctgctgtgcgtagagggaagcggaagcttcctgataaagtaattccagaa
aaaattgcagctataattccagaatgtgctctttacagtcaattgcttgaatttgaggct
cgtgtggatgctgcacttgcaagaaagaagattgacatcatggaatctttgaaaaaccct
gtccggcttcaaaaggttcttaggatatatgtcttcaatacttttactaaccaaacagat
ataagtatagataaggaaaattctgagccgccttcatggtcccttaggctaattggacga
attttagaggatggcaaggatcctattgcagaaggacagatggagaaaccaaaatgttca
tatccaaagttatcatcattcttcaagaaaatcacgatatacttggatcagaatctatat
cctgaaaatcacgtgatcttatgggagagttctcgatcaccagcgctctgtgaaggtttt
gaggtgaagagaaaaggcgacaaggagttcacagcaattattagattggagatgaattat
gagcctgaaaaatttaaattgtcttcagcattgcaggaagttcttgggattgacgtggaa
acacgtcccagaataatggcagcactttggcattatgtaaagatgaaaaagttgcaaatt
cctggtgaagcttccttcttcatgtgtgatccaccactaaggaaggtttttggtgaagat
aaattgaaattctccatggttcctcagaagattactccacacctcactccacctgggccc
atacatttggaacatagggtgaagctttctggggatggtccatctggaaatacttgttat
gatgtactggttgacgttccattgtcactagagggtaaaaaggattttttgactagttta
gagcaaaacaaatcaatcgattcctgtgatgaatctatttcttctgctttgaagaagata
cacgagcattgtcgccggcgtgctttctttcttggatttagtcagtcgcctgcagagttc
attaataccttaataacttctcaagccagggatttaaaagttgcttctgctgatgctggt
cgtgatctggagaaagagcgtcgggcagaattctatgatcaaccatggactgaggatgct
gttatccggtacttaaatcggaagcctgcagttggaagtgaagcagctggaaacaagtag
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